PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028077431.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 868aa MW: 99963.6 Da PI: 7.932

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028077431.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	61.6	2.3e-19	66	152	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Y++YAk+ GFsv+k++ kk ++g+++ C++ gk++ + ++ + r r++t+tgCka l+ ++ +++w++++++l+HnHel+p XP_028077431.1 66 NYYRRYAKQNGFSVSKRTCKKG-DDGKTKYVSVSCNRAGKPRIRPSN---SIRLRKQTKTGCKAGLNAVLRPNDRWVLNSFVLDHNHELSP 152 69*************99997.88889***********9998...9999*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 868 aa Download sequence
MEEEVASVCS SVEVDGDIIE IEMNKGSVEL NEANIENEMG EMENAEDNVE DPKLGMEFNS 60 IDEIYNYYRR YAKQNGFSVS KRTCKKGDDG KTKYVSVSCN RAGKPRIRPS NSIRLRKQTK 120 TGCKAGLNAV LRPNDRWVLN SFVLDHNHEL SPGKCKFYKC NKILQPHVKG RLELNDGIDS 180 GMNKNSNSIV REAGGHENMP ILEKDCKKFV KKTGHLRLGE GDATAMHDYF LKMQVDNSDF 240 FYAMDFNEKG RLRNVFWADA RSRAAFKEFG DVVTFDTTCL VNKYDLPFAH FVGVNHHGQL 300 MLLGCALISH EDTETFTWLF QSWLACMYRC SPIAIITDHD IAMKKAIEIV FPNARHRWCL 360 WHIMKKLSEK LSGYEQYESM QLCMQKVVYD SLTKEEFEEN WAKFIENHQL KTNEWLLGLY 420 DERHRWVPAF VKDLFWAGMS AIQQSESMPT FFDEFINSKT TLKQFLEQYD NALAKKVENE 480 NSEEFKSFNS YIPCITHYEL EKQFQSAYTM AKFEEFQQEL IGKIYCYLSS RKEGGGFVEY 540 EVEQDVSFEE SLQRAIFNVS FKEETSEANC TCRLFEFKGI PCRHQIMVFL QRGIHRIPNK 600 YILKRWNKNV KRRHTKVRIC YDNSSLKLEA RRYDKMCNAF YEVADLAADF EYRCEKVMAH 660 LHELKEDFKE VEVVSGSNKH VSMVTHNEST SQGDGIVISK GSTNILDPLT VRQKGRPPCK 720 RKQSKVEKVI KEKKEGKKKL KTTTTEGNIE KNNNDDGNLH GTTSTIGFVA PGTQETIHRN 780 KSGMKQSQLV GGISYDLVLP NVIGHPSITA MRPHLGQNNM LQGFGMHPFM GHNHPSPYWR 840 AGQSSFIHMV NAQAKNPRLH ENGKSEKS

Sequence ? help Back to Top

Protein Sequence Length: 868 aa Download sequence

MEEEVASVCS SVEVDGDIIE IEMNKGSVEL NEANIENEMG EMENAEDNVE DPKLGMEFNS  60
IDEIYNYYRR YAKQNGFSVS KRTCKKGDDG KTKYVSVSCN RAGKPRIRPS NSIRLRKQTK  120
TGCKAGLNAV LRPNDRWVLN SFVLDHNHEL SPGKCKFYKC NKILQPHVKG RLELNDGIDS  180
GMNKNSNSIV REAGGHENMP ILEKDCKKFV KKTGHLRLGE GDATAMHDYF LKMQVDNSDF  240
FYAMDFNEKG RLRNVFWADA RSRAAFKEFG DVVTFDTTCL VNKYDLPFAH FVGVNHHGQL  300
MLLGCALISH EDTETFTWLF QSWLACMYRC SPIAIITDHD IAMKKAIEIV FPNARHRWCL  360
WHIMKKLSEK LSGYEQYESM QLCMQKVVYD SLTKEEFEEN WAKFIENHQL KTNEWLLGLY  420
DERHRWVPAF VKDLFWAGMS AIQQSESMPT FFDEFINSKT TLKQFLEQYD NALAKKVENE  480
NSEEFKSFNS YIPCITHYEL EKQFQSAYTM AKFEEFQQEL IGKIYCYLSS RKEGGGFVEY  540
EVEQDVSFEE SLQRAIFNVS FKEETSEANC TCRLFEFKGI PCRHQIMVFL QRGIHRIPNK  600
YILKRWNKNV KRRHTKVRIC YDNSSLKLEA RRYDKMCNAF YEVADLAADF EYRCEKVMAH  660
LHELKEDFKE VEVVSGSNKH VSMVTHNEST SQGDGIVISK GSTNILDPLT VRQKGRPPCK  720
RKQSKVEKVI KEKKEGKKKL KTTTTEGNIE KNNNDDGNLH GTTSTIGFVA PGTQETIHRN  780
KSGMKQSQLV GGISYDLVLP NVIGHPSITA MRPHLGQNNM LQGFGMHPFM GHNHPSPYWR  840
AGQSSFIHMV NAQAKNPRLH ENGKSEKS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	716	726	RPPCKRKQSKV
2	720	740	KRKQSKVEKVIKEKKEGKKKL
3	721	741	KRKQSKVEKVIKEKKEGKKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-124	FAR1 family protein