PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028077380.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 237aa    MW: 26983.2 Da    PI: 5.7895
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028077380.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.13.3e-2189139155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +grW+AeIrdp     r kr++lg+f+t+eeAak +++a+ +l+g
  XP_028077380.1  89 KKFRGVRQRP-WGRWAAEIRDP---A-RkKRVWLGTFDTPEEAAKVYDRAAVNLKG 139
                     59********.**********8...2.35**********************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MSANPVTKFS ERPGNFPTTF RWKVVRIILA DPDATDNSSD DDDDAKVVKR HVKEIHFNQS  60
IHSVPKPQQR KRRKLRSFGS PESDTSRRKK FRGVRQRPWG RWAAEIRDPA RKKRVWLGTF  120
DTPEEAAKVY DRAAVNLKGP DAVTNFPKVD VTEAVVDDVK KDGEGLQKVE ASSPKSVLCY  180
EELTPFDGFS YGDVDVFGFD IDLPLCLPHP SVLENYYGED DLGEFDFEFA DFLVEGR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17076RKRRKLR
27090RKRRKLRSFGSPESDTSRRKK
37191RKRRKLRSFGSPESDTSRRKK
47292RKRRKLRSFGSPESDTSRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11140.12e-29ERF family protein