PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028077357.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 342aa    MW: 37086.5 Da    PI: 7.5677
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028077357.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.80.000442222601255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  XP_028077357.1 222 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 260
                     6677889999999999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MNRGVLQSLP VQQMLTGSPN WWNINHMRPP SQPSSPFLIP PSNLFPQYTP PSAAPPPPPS  60
SSSSSLLPLS SSSWHDNNQE LPESWSQFFL GGLVGEEDKS GLSHVQGKKL ENWEAQLLQQ  120
ASNAPSVEIK QENSAANSYV YGLGNGEYHA AKPTWSQIMP ASSPKSCVTS LGSNMLEFSS  180
NKLDGRHPPP DRSSECNSTA TGGVIKKARV QPSSTQSTFK VRKEKLGDRI TALHQLVSPF  240
GKTDTASVLL EAIGYIRFLQ NQIEALSLPY LGSGSGNMWQ HQQSLLNDNC MKKKGAAEQD  300
SHEESKDLRS RGLCLVPISC TLQVGSDNGA DYWAPALGGG FR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.11e-89bHLH family protein