PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028077181.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 311aa MW: 34781.7 Da PI: 4.5115

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028077181.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.8e-09	242	275	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ee+ +L++ +gL+++q+ +WF N+R ++ XP_028077181.1 242 WPYPTEEEKMKLSEVTGLDQKQINNWFVNQRKRH 275 58*****************************885 PP
2	ELK	35.3	2.5e-12	195	215	1	21
ELK 1 ELKhqLlrKYsgyLgsLkqEF 21 ELK +LlrKYsgyL+sL++ F XP_028077181.1 195 ELKVMLLRKYSGYLSSLRKDF 215 9******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MDDLYCIHSS ISCSDDVTGG VGNSPTTVQA FDGAVQFETA EMEVGGLEMS DLIKDQIANH 60 PLCPNLVSAY IQCRKVGAPL EMASLLEEIS KQNRHSTSSR CEIGADPELD EFMESYCEVL 120 HRYKEELSKP FDEATTFLSN IESELSSLCN ETLTTSFKPG NCPSDEASGT SEEDLSCGEA 180 AESRESSGPQ SREQELKVML LRKYSGYLSS LRKDFFKKRT KGKLSKDARI ALLDWWNTHY 240 RWPYPTEEEK MKLSEVTGLD QKQINNWFVN QRKRHWRPSE DMRFALMEGV SGGIGGPVYF 300 DSAGEAGSVD N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G70510.1	2e-80	TALE family protein