PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028077116.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family SBP
Protein Properties Length: 301aa    MW: 33835.5 Da    PI: 9.6787
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028077116.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP1261.6e-39149226178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +Cq+egC adl++ k+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh+lsefD++krsCr+rLa+hn+rrrk+++
  XP_028077116.1 149 RCQAEGCIADLTHSKHYHRRHKVCEFHSKAATVVTAGLTQRFCQQCSRFHQLSEFDNGKRSCRKRLADHNRRRRKSHH 226
                     6**************************************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MLEYEWGNPS TVIFSAEDSD QSRQIFDQSF NETLLHQTGF SQPHYHFHQN PTQTQTHTHS  60
HFHSLYDPRS LFAPSYPPPS PAFLPPVAGP TGFVPKSEPG GGVVDFGSRI GLNLGGRTYF  120
ASSSGDDFVN RMYRRPRSVE PGSMINSPRC QAEGCIADLT HSKHYHRRHK VCEFHSKAAT  180
VVTAGLTQRF CQQCSRFHQL SEFDNGKRSC RKRLADHNRR RRKSHHQLPN HETKSQLQNA  240
RHSSSENLAR TSANSEAQSS SLVTMAISPP RISLDCFRQR LFQATTTTPS LSTSSLFFSS  300
G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02065.13e-67SBP family protein