PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028076442.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C3H
Protein Properties Length: 682aa    MW: 75905 Da    PI: 6.8116
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028076442.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.77.3e-07116140526
                     --SGGGGTS...--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartG...tCkyGdrCkFaHg 26 
                     lC+  ar+G    C+y d+C+F+H+
  XP_028076442.1 116 LCPEVARSGdvtSCPYSDKCRFSHD 140
                     8***********************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 682 aa     Download sequence    
MKHISATPLL LSTEETLHRR EASSTGMDLS TAEEAPSDGG VVAEKTAEEL VAKAIAPVKK  60
EFLRPPPIRP STSNHLTNAV ASNSNSNSNS NLLKEKKSKR QLKRERLQEK KSALHLCPEV  120
ARSGDVTSCP YSDKCRFSHD VEAFKALKPA DIQGDCPFLS TEGPCPYGMA CRFSSTHKDD  180
FTAEALNGQK KSSEMNGLNK DVQKLLWKNK MKFPKADAQL KLLGLLVKMN SKHEKLSDKE  240
ESDQTTSNGS PATEVNSCEV AGNSNNNVDN PPQLPEKDDC ADGDSVLAKD VEESCPQAES  300
GTTTDCIPAE TDGSLKLHPR EKKLIDFREK LYLAPLTTVG NLPFRRVCKV LGADVTCGEM  360
AMCTNLLQGQ ASEWALLRRH SSEDLFGVQI CGAYPDTVTR AVELVNQECT VDFIDINMGC  420
PIDIVVNKGA GSALLTKPMR MKSIIQAAST TVDRPITVKV RTGYFEGRRR IDSLIEDIGQ  480
WGASAVTIHG RSRQQRYSKL ADWEYIYQCA RKAPDTLQVL GNGDVFSYLD WNQNKSSCPE  540
LSTCMIARGA LIKPWIFTEM KEQRTWDISS GERLNILKDY IRFGLEHWGS DAKGVETTRY  600
FLLEWLSYTH RYIPVNLLDV IPQRLNWRPP SYFGRDDLET LMASESAADW IRISEMLLGK  660
VPDGFTFTPK HKSNSYDRAE NG