PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028076442.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | C3H | ||||||||
Protein Properties | Length: 682aa MW: 75905 Da PI: 6.8116 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 20.7 | 7.3e-07 | 116 | 140 | 5 | 26 |
--SGGGGTS...--TTTTT-SS-SS CS zf-CCCH 5 lCrffartG...tCkyGdrCkFaHg 26 lC+ ar+G C+y d+C+F+H+ XP_028076442.1 116 LCPEVARSGdvtSCPYSDKCRFSHD 140 8***********************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 682 aa Download sequence |
MKHISATPLL LSTEETLHRR EASSTGMDLS TAEEAPSDGG VVAEKTAEEL VAKAIAPVKK 60 EFLRPPPIRP STSNHLTNAV ASNSNSNSNS NLLKEKKSKR QLKRERLQEK KSALHLCPEV 120 ARSGDVTSCP YSDKCRFSHD VEAFKALKPA DIQGDCPFLS TEGPCPYGMA CRFSSTHKDD 180 FTAEALNGQK KSSEMNGLNK DVQKLLWKNK MKFPKADAQL KLLGLLVKMN SKHEKLSDKE 240 ESDQTTSNGS PATEVNSCEV AGNSNNNVDN PPQLPEKDDC ADGDSVLAKD VEESCPQAES 300 GTTTDCIPAE TDGSLKLHPR EKKLIDFREK LYLAPLTTVG NLPFRRVCKV LGADVTCGEM 360 AMCTNLLQGQ ASEWALLRRH SSEDLFGVQI CGAYPDTVTR AVELVNQECT VDFIDINMGC 420 PIDIVVNKGA GSALLTKPMR MKSIIQAAST TVDRPITVKV RTGYFEGRRR IDSLIEDIGQ 480 WGASAVTIHG RSRQQRYSKL ADWEYIYQCA RKAPDTLQVL GNGDVFSYLD WNQNKSSCPE 540 LSTCMIARGA LIKPWIFTEM KEQRTWDISS GERLNILKDY IRFGLEHWGS DAKGVETTRY 600 FLLEWLSYTH RYIPVNLLDV IPQRLNWRPP SYFGRDDLET LMASESAADW IRISEMLLGK 660 VPDGFTFTPK HKSNSYDRAE NG |