PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028076243.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GRAS
Protein Properties Length: 761aa    MW: 85953.6 Da    PI: 4.6296
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028076243.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS369.93.5e-1133857581373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+ v+++d + a++ L++++++asp g+  qR+a +f+ AL+arla+++s++y+al++++ +    +++l+a++l++ ++P+ + + 
  XP_028076243.1 385 LRTLLINCAQSVATDDRRTAKEQLKQIRQHASPFGNGSQRVAYVFADALEARLAGTGSQIYSALASKRIT---AADKLKAYQLYVSACPFKQATI 476
                     6789************************************************************999999...9********************* PP

            GRAS  96 ltaNqaIleavege..ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
                     + aN++Il+ + ++   ++HiiDf+i +G+QWp L+q L++ p+g+p+lRiTg++ p+sg   +e +eetg+rLak++e+++v+f++++ +a+++
  XP_028076243.1 477 FFANKMILDLAMKStkAKLHIIDFGILYGFQWPILIQFLSTLPGGAPELRITGIDLPRSGfrPAELVEETGRRLAKYCERFNVRFQYHA-IAQKW 570
                     *********9888766889****************************************99999*************************.7**** PP

            GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281
                     e++++e+L++ ++E+laVn+ ++  +l+de+v+++s+rd+vLkl+++++P++++++  + ++n++ F++rf eal yys++fd ++ ++pres+e
  XP_028076243.1 571 ETIKIEDLNILSDEVLAVNSFFRFSNLPDETVDVDSPRDAVLKLIRKMNPDIFTHSIVNGSYNAPFFVTRFREALFYYSSMFDIFDITMPRESQE 665
                     *********************************************************************************************** PP

            GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373
                     r+++E+e++gre++n++acegaer+er et+++W++r+++aGFk +pl++++ ++ +  ++k +  + + ++e+ +++++gW+++   + S+W
  XP_028076243.1 666 RVNLEKEFFGREVMNIIACEGAERVERPETYKQWQARIMRAGFKMLPLEQETLNKFRGKVKKAGyHKDFVIDEDGQWMLQGWRGKIFCASSCW 758
                     ***************************************************************99999************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 761 aa     Download sequence    
MIMDPSFTEF SDPTQGFKFN DDSMFPPFDQ SENLSNMFQF KDDLVDLNSI DLSFLSPDSL  60
NPGFVAPISS TSSEVDSPDD SDYSNNLLNY INSILMEENM EQKPSMFDDP LALQETEKSL  120
YDVLGSASPN EPPPLYFNHP NIESPDFLFG SSSMQSTTSN ISGSNSIDSQ CIVDPGEQKL  180
SVQSYTSGYP FETTLKPTSQ LSFDSTMSFS DDSNGLIDPS MSSHLISNIF SNSESILQFN  240
RGMEEAKKFL PKNNPLVVEL DALPPESEQR ASEVVVKVEE GRESSPNGLR GRKNHHREDS  300
VLEEERSSKQ SAVYMESVEE AELSALFDKV LLCTEMRSEI ACCNGDEEEQ TEETKTPHPN  360
GQPHGSSSAK TRTRKQDEKN EVVDLRTLLI NCAQSVATDD RRTAKEQLKQ IRQHASPFGN  420
GSQRVAYVFA DALEARLAGT GSQIYSALAS KRITAADKLK AYQLYVSACP FKQATIFFAN  480
KMILDLAMKS TKAKLHIIDF GILYGFQWPI LIQFLSTLPG GAPELRITGI DLPRSGFRPA  540
ELVEETGRRL AKYCERFNVR FQYHAIAQKW ETIKIEDLNI LSDEVLAVNS FFRFSNLPDE  600
TVDVDSPRDA VLKLIRKMNP DIFTHSIVNG SYNAPFFVTR FREALFYYSS MFDIFDITMP  660
RESQERVNLE KEFFGREVMN IIACEGAERV ERPETYKQWQ ARIMRAGFKM LPLEQETLNK  720
FRGKVKKAGY HKDFVIDEDG QWMLQGWRGK IFCASSCWVP A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein