PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028076215.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 211aa MW: 23112.9 Da PI: 8.6643 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.9 | 2.6e-18 | 5 | 55 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr++ +g+Wv+eIr+p +r++lg+f tae Aa+a+++a+ ++g XP_028076215.1 5 KKFRGVRQRQ-WGSWVSEIRHP-----LlkRRIWLGTFETAEAAARAYDQAAILMNG 55 59*****999.**********8.....334**********************98876 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 211 aa Download sequence |
MVQSKKFRGV RQRQWGSWVS EIRHPLLKRR IWLGTFETAE AAARAYDQAA ILMNGQNAKT 60 NFPPSTNREG GVDNNTQSGQ GNPISPSTMS SILSAKLRKC CKDPSPSLTC LRLDTDNSHI 120 GVWQKHAGTR SGSNWVMRVQ LGKTKNTESD GSSSSLSFSS STSSSLSVTS GMEVGEEMDE 180 ENRVAMQMIE ELLNWNCPMP SPLDGVPSLF G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G11190.1 | 6e-66 | ERF family protein |