PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028076169.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 498aa    MW: 54487.2 Da    PI: 6.9406
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028076169.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B399.91.5e-31154258199
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 
                     f+kv tpsdv+k++rlv+pk++ae++    ++ +e++  l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  +
  XP_028076169.1 154 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSTNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGvGElGK 248
                     89***************************966778999*************************************************66699999 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      +l++ ++r+
  XP_028076169.1 249 DRLFIDWRRR 258
                     9999999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 498 aa     Download sequence    
MNFMAKGSSQ GFYGEDQNQN QIMISNSTRG NLPFYSSSST TSSSSSSSQP HKNLVPLTFH  60
QQQNQHHQHQ HQPQRGSWLE PQQPSAEEMT SMRCYTGGAG MGMEHMDASP AATGNNGDHH  120
HRDNDVNGLL ELGGGGGGGT STCVGVVMEK EHMFDKVVTP SDVGKLNRLV IPKQHAEKYF  180
PLDSSTNEKG LLLNFEDRNG KPWRFRYSYW NSSQSYVMTK GWSRFVKEKK LDAGDIVSFQ  240
RGVGELGKDR LFIDWRRRPD VSVLPPSLPS LPLSQQYFSF HRSTAAANHP WSPLLLQQTQ  300
AAPTSRRDHS LFQHINATNY QQPHSTNYGY SYSGSGGGGG PYSYNYNSVV NPCSSSVIYL  360
RSAAGAASAP QQAGMVQLQS GFGGGGGGNS ESEVEPMVFE SVPVVHGQAA AKRLRLFGVN  420
MDCPMSESDQ ECDILSSTTV PHPHATMASH LSSSPIQHPL QLRLYSGSPL PPLHTTDSDS  480
SDLLDKGKSS DMSFDFDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.15e-66B3 family protein