PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028076086.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | SBP | ||||||||
Protein Properties | Length: 533aa MW: 60279 Da PI: 5.1409 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 119.9 | 1.3e-37 | 125 | 201 | 1 | 77 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv+gCead+se+k yhrrh+vC +++a++v+++gl++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrr+k XP_028076086.1 125 RCQVPGCEADISELKGYHRRHRVCLRCANASTVVLDGLSKRYCQQCGKFHILSDFDEGKRSCRRKLERHNNRRRRKP 201 6***********************************************************************99975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 533 aa Download sequence |
MDTLSLPSPP PPPQPSVSDM ENLFSNPPLN DDPSSSSLWD WSDFLDFNLE DQLNISFDSS 60 ENTPVLPPPD SDSVDRIRKR DPRLICSNFL ARIPCACPEL DEKEEEEEGV PVKKRPRAAA 120 GAAARCQVPG CEADISELKG YHRRHRVCLR CANASTVVLD GLSKRYCQQC GKFHILSDFD 180 EGKRSCRRKL ERHNNRRRRK PSESKVAVEK DPQELVLADD VARDDENEKD STCLSSQLTE 240 REPLLESEEG QIPTLCSNPS SQNIQSDSVA SFVVSREPQI DGEKDESKHA HSSFYCDNKS 300 AYSSLCPTGR ISFKLYDWNP AEFPRRLRHQ IFQWLSSMPV ELEGYIRPGC TILTAFIAMP 360 NSMWFKLLQE PVVYIHDFVA APGKMLSGRG TFLVYLDNVI FRVMKDGTSV IQIKAEEQAP 420 KLHYVHPTCF EAGKPMEFVA CGSNLLQPKF RFLVSFAGKY LAYDYSVPPP YDDSEGVTAN 480 FNHQLLKICI RHTEPDLFGP AFIEESCTGR YEVQIVFVSD RKLQSFIDLS NTE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 187 | 199 | RRKLERHNNRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18830.2 | 1e-162 | SBP family protein |