PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028076085.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family SBP
Protein Properties Length: 795aa    MW: 89463 Da    PI: 6.1304
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028076085.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP119.12.2e-37125201177
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                     +Cqv+gCead+se+k yhrrh+vC  +++a++v+++gl++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrr+k 
  XP_028076085.1 125 RCQVPGCEADISELKGYHRRHRVCLRCANASTVVLDGLSKRYCQQCGKFHILSDFDEGKRSCRRKLERHNNRRRRKP 201
                     6***********************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence    Length: 795 aa     Download sequence    
MDTLSLPSPP PPPQPSVSDM ENLFSNPPLN DDPSSSSLWD WSDFLDFNLE DQLNISFDSS  60
ENTPVLPPPD SDSVDRIRKR DPRLICSNFL ARIPCACPEL DEKEEEEEGV PVKKRPRAAA  120
GAAARCQVPG CEADISELKG YHRRHRVCLR CANASTVVLD GLSKRYCQQC GKFHILSDFD  180
EGKRSCRRKL ERHNNRRRRK PSESKVAVEK DPQELVLADD VARDDENEKD STCLSSQLTE  240
REPLLESEEG QIPTLCSNPS SQNIQSDSVA SFVVSREPQI DGEKDESKHA HSSFYCDNKS  300
AYSSLCPTGR ISFKLYDWNP AEFPRRLRHQ IFQWLSSMPV ELEGYIRPGC TILTAFIAMP  360
NSMWFKLLQE PVVYIHDFVA APGKMLSGRG TFLVYLDNVI FRVMKDGTSV IQIKAEEQAP  420
KLHYVHPTCF EAGKPMEFVA CGSNLLQPKF RFLVSFAGKY LAYDYSVPPP YDDSEGVTAN  480
FNHQLLKICI RHTEPDLFGP AFIEVENESG LSNFIPILIG NKEICSEMKI MEQRFEASLS  540
LSLKESKFMA ASSVHDSCEV SILRQTAFSQ FILDTAWLLR NPALEDMKYR LSSSQIGSFN  600
RLLTFLIQNK SISILERVLH YMETLMDDKK LHCMTNGIAD AEMKLLQSNV DHARGIVSAR  660
LQENVDSVRH SRNLVPKGNC VYQSSQIDMR SVVSFIDQNM EVTEKGSLDA VEGSNSLDHS  720
GTVPLLNRDV EMSMKEWPRK SCSLVFSSRI LTSRPLIFVI AAAVVCCGIC VVLLHPQKVG  780
KIATTIRRCL FVNTA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1187199RRKLERHNNRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18830.30.0SBP family protein