PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028076082.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 218aa MW: 24949.3 Da PI: 9.0381 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.4 | 8.1e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKA+ELS+LCdae+a+i+fs tg+l+ey+s XP_028076082.1 9 KKIDNVTARQVTFSKRRRGLFKKAHELSTLCDAEIALIVFSATGRLFEYAS 59 68***********************************************86 PP | |||||||
2 | K-box | 41.9 | 4.4e-15 | 95 | 171 | 23 | 99 |
K-box 23 kLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 L ke e+ e+R+l Ge+L++L ++eL++Le+ Le +l+++ ++K++ + ++i l++ke +l een L+++++ XP_028076082.1 95 MLSKEAEERTLELRQLRGEELHELGFEELKKLEKSLEGGLSRVLKTKDDRVEKEIAALRRKEARLMEENAWLKQQVQ 171 5666666667789*************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MVRQRIQIKK IDNVTARQVT FSKRRRGLFK KAHELSTLCD AEIALIVFSA TGRLFEYASS 60 STRQVIERHN LQPQNLVQLN QPSLELQLEN STRAMLSKEA EERTLELRQL RGEELHELGF 120 EELKKLEKSL EGGLSRVLKT KDDRVEKEIA ALRRKEARLM EENAWLKQQV QMQIVNMGQP 180 QEQGQSSESI TNNGSTVAPP QDYDSSDTSL KLGLPYQS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 4e-57 | MIKC_MADS family protein |