PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028076067.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 342aa    MW: 37147.4 Da    PI: 4.6869
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028076067.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.31.4e-15200236135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg ++  Tp +Rrgp g++tLCnaCGl+++ kg+
  XP_028076067.1 200 CQHCGISEksTPAMRRGPAGPRTLCNACGLRWANKGT 236
                     *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MEAVNPIPLQ ARPHEELEDH MQVSSIRVDE DGGGGGFEAD DVSGGCAVEV QVNSVILPVN  60
NNPVALPSPT SELSISFEGE VYVFPAVTPE KVQAVLLLLG GREIPNSVPS SEFLLQQNNK  120
SLGGASSRSN ISRRTASLVR FRAKRKERSF EKKIRYSCRK ELALRMHRKN GQFASIKKLA  180
DGDWHPSDGT PPPVSAVRKC QHCGISEKST PAMRRGPAGP RTLCNACGLR WANKGTPLGV  240
ELVEAENLYH NQNEQGSPEE MKPLAMELGN PSMMQNEQDS LEATEAVTDN SAVQVENSSA  300
NLDDQETLDE LASASGTEFE IPTNFDEQVD VDSHMVTGWP GT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.23e-63GATA family protein