PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028075997.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 186aa MW: 20662.2 Da PI: 9.7561 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.5 | 2.9e-17 | 52 | 100 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a +l+g XP_028075997.1 52 YRGVRKRQ-WGKWVSEIREPRK---HNRIWLGSFNTPEMAARAHDVASYCLKG 100 9****888.**********954...48*********************99988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MATPPTPAVY SAETLRKLPK PSSSSSSPPP SPPPPSSSSA KQSESSRSQK AYRGVRKRQW 60 GKWVSEIREP RKHNRIWLGS FNTPEMAARA HDVASYCLKG NKALLNFPEE IELLPRPSTS 120 TPKDIQAAAA AAAAAAAAHV GTSDEKKGRS KTSNEDDFWS EIELPELMEF RREFWLPESQ 180 WEDMLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01250.1 | 2e-45 | ERF family protein |