PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028075744.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 356aa MW: 39627.9 Da PI: 9.6581

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028075744.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	89.8	5.9e-28	53	137	3	66
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....................s 66 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk ++WLl + k+ i++l+ + s XP_028075744.1 53 GGKDRHSKVYTIRGLRDRRIRLSVPTAIQLYDLQDKLGLSQPSKVVDWLLDATKHDIDKLPPLqmplgnftfhqptatlvshdlS 137 79*************************************************************6666655443322222222221 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MITSSREKDF QAKGEGENNN TSNIKLSTKA PSSSRQWSAF KNPRIVRVSR SFGGKDRHSK 60 VYTIRGLRDR RIRLSVPTAI QLYDLQDKLG LSQPSKVVDW LLDATKHDID KLPPLQMPLG 120 NFTFHQPTAT LVSHDLSTLQ SSFSPFFNAN SAYFKDGNKI NYNVGNEQMM GKSKDWGSDA 180 TMGAKLKGVE RETIGEKIKW MRTNEEESQD GNGGNYNPQV SAHDFFPIAS HSSFSNMLSN 240 TMPYSNYYHW DPSNLSLSQF GSHGFASQTE GSNNTGHLAS LPSSFLSPPS NFPPYHPYIS 300 APTENDTRQI NHFLPNLPMP SLHPISSPVG VSTTSKNFHL HSQNDERQPN KGSTGS

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MITSSREKDF QAKGEGENNN TSNIKLSTKA PSSSRQWSAF KNPRIVRVSR SFGGKDRHSK  60
VYTIRGLRDR RIRLSVPTAI QLYDLQDKLG LSQPSKVVDW LLDATKHDID KLPPLQMPLG  120
NFTFHQPTAT LVSHDLSTLQ SSFSPFFNAN SAYFKDGNKI NYNVGNEQMM GKSKDWGSDA  180
TMGAKLKGVE RETIGEKIKW MRTNEEESQD GNGGNYNPQV SAHDFFPIAS HSSFSNMLSN  240
TMPYSNYYHW DPSNLSLSQF GSHGFASQTE GSNNTGHLAS LPSSFLSPPS NFPPYHPYIS  300
APTENDTRQI NHFLPNLPMP SLHPISSPVG VSTTSKNFHL HSQNDERQPN KGSTGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	2e-48	TCP family protein