PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028075742.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 373aa MW: 41594.2 Da PI: 8.9261

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028075742.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	89.7	6.6e-28	70	154	3	66
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....................s 66 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk ++WLl + k+ i++l+ + s XP_028075742.1 70 GGKDRHSKVYTIRGLRDRRIRLSVPTAIQLYDLQDKLGLSQPSKVVDWLLDATKHDIDKLPPLqmplgnftfhqptatlvshdlS 154 79*************************************************************6666655443322222222221 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MSCEMHEIST QSQCLEKMIT SSREKDFQAK GEGENNNTSN IKLSTKAPSS SRQWSAFKNP 60 RIVRVSRSFG GKDRHSKVYT IRGLRDRRIR LSVPTAIQLY DLQDKLGLSQ PSKVVDWLLD 120 ATKHDIDKLP PLQMPLGNFT FHQPTATLVS HDLSTLQSSF SPFFNANSAY FKDGNKINYN 180 VGNEQMMGKS KDWGSDATMG AKLKGVERET IGEKIKWMRT NEEESQDGNG GNYNPQVSAH 240 DFFPIASHSS FSNMLSNTMP YSNYYHWDPS NLSLSQFGSH GFASQTEGSN NTGHLASLPS 300 SFLSPPSNFP PYHPYISAPT ENDTRQINHF LPNLPMPSLH PISSPVGVST TSKNFHLHSQ 360 NDERQPNKGS TGS

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MSCEMHEIST QSQCLEKMIT SSREKDFQAK GEGENNNTSN IKLSTKAPSS SRQWSAFKNP  60
RIVRVSRSFG GKDRHSKVYT IRGLRDRRIR LSVPTAIQLY DLQDKLGLSQ PSKVVDWLLD  120
ATKHDIDKLP PLQMPLGNFT FHQPTATLVS HDLSTLQSSF SPFFNANSAY FKDGNKINYN  180
VGNEQMMGKS KDWGSDATMG AKLKGVERET IGEKIKWMRT NEEESQDGNG GNYNPQVSAH  240
DFFPIASHSS FSNMLSNTMP YSNYYHWDPS NLSLSQFGSH GFASQTEGSN NTGHLASLPS  300
SFLSPPSNFP PYHPYISAPT ENDTRQINHF LPNLPMPSLH PISSPVGVST TSKNFHLHSQ  360
NDERQPNKGS TGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	2e-48	TCP family protein