PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028075592.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 307aa    MW: 33487.6 Da    PI: 6.4447
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028075592.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2163.4e-05100122123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C++ Fs++  L  H++ H
  XP_028075592.1 100 FSCNYCKREFSTSQALGGHQNAH 122
                     89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MEAPGSDQPC PSEASSISAA SHEGRDEEMK TKMMMKEKNH VEGSDKSKSH LLLDLKLSNN  60
NGDDDEDDTR DHGSKPEVDI FNSSNGGSSQ VCESSKIRIF SCNYCKREFS TSQALGGHQN  120
AHKQERALAK RRHNSMDVGP YGFGHPPPYP YYSPYSSYPF QIPSSFNRSP LGIRMDSMIH  180
KPSSPSFPWT SSSPPGYRYL GHDGWPPRPS TSFVVNPQSQ SSTFDRLRMM EGFQAHNNIG  240
GFGGGGAAAV GSSTSRFHNF GGGDGSSAAS TAITTTDHGE KNLWNRLGFS ESNPPDDDPD  300
LDLNLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01860.16e-16C2H2 family protein