PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028075472.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HSF
Protein Properties Length: 305aa    MW: 35033.1 Da    PI: 6.3493
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028075472.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind90.22.6e-2825112298
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Flkk+++++ed++++ +isw+++++sfvv+d+++f++++LpkyFkh+nf+S + QL +YgFkk+++++         weF+++ F++gkk+l ++
  XP_028075472.1  25 FLKKTFHMVEDPDTDIIISWTASQKSFVVWDHRQFSTNLLPKYFKHNNFSSVICQLYTYGFKKIDSNR---------WEFANEAFQEGKKHLFKN 110
                     9********************999****************************************9998.........*****************9 PP

                     XX CS
    HSF_DNA-bind  97 ik 98 
                     i 
  XP_028075472.1 111 IT 112
                     96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MPCSPPISSA PKPMEGLHET GPSPFLKKTF HMVEDPDTDI IISWTASQKS FVVWDHRQFS  60
TNLLPKYFKH NNFSSVICQL YTYGFKKIDS NRWEFANEAF QEGKKHLFKN ITHLYVQFIV  120
CLNSANFGIE TELEKLRNDR MKMKMEIMKL KQQQENTESY LAVVKERIGY TECNQQDILI  180
FMAKAFSNPA FFHQFIHLMG PKKHSEVERL FSASLDEKSS PSQDQKINAA PGPMSPDLSS  240
DNYILWEKLL EDGLICENGS AQVEAELVQH QSKIVLQLEN LIAKPPDWAS YVKDLGEQVS  300
CLESK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.12e-68HSF family protein