PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028075471.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HSF | ||||||||
Protein Properties | Length: 171aa MW: 18614.8 Da PI: 3.978 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 69.7 | 6e-22 | 100 | 160 | 2 | 62 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTE CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgF 62 Flkk+++++ed++++ +isw+++++s+vv+d+++f++++LpkyFkh+nf+SF+ QL +Y+ XP_028075471.1 100 FLKKTFHMVEDPDTDIIISWTASQKSLVVWDHRQFSTNLLPKYFKHNNFSSFICQLYTYDA 160 9********************999***********************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
METLKIKQEN IVVIDDDIPG GGGGGLFEEE EEEEEEETVK VVELNEEAVV LVDDDWVSGE 60 GVVLVGGGGG GGGDSMPCSP PISSAPKPMV GLHETGPSPF LKKTFHMVED PDTDIIISWT 120 ASQKSLVVWD HRQFSTNLLP KYFKHNNFSS FICQLYTYDA ASILSQTIIN N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26150.1 | 4e-31 | HSF family protein |