PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028075463.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

CAMTA

Protein Properties

Length: 939aa MW: 106079 Da PI: 7.2224

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028075463.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	161.1	2.1e-50	41	157	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e k+rwl+++ei+aiL n++ +++ ++ t pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg e +++yYah+e+ ptf r XP_028075463.1 41 EEaKARWLRPNEIHAILCNYKYFSVYVKPVTLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGDEERIHVYYAHGEDYPTFVR 135 45599**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 rcywlL+++le++vlvhy+e++ XP_028075463.1 136 RCYWLLDKALEHVVLVHYRETQ 157 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 939 aa Download sequence
MIGLSVLRSS QMESAVPGRL AGSEIHGFHT MEDLDVGNIM EEAKARWLRP NEIHAILCNY 60 KYFSVYVKPV TLPKSGTIVL FDRKMLRNFR KDGHNWKKKK DGKTVKEAHE HLKVGDEERI 120 HVYYAHGEDY PTFVRRCYWL LDKALEHVVL VHYRETQEGS PVTPVDSNSS SGPSDPSASW 180 ILSEETNSAA DPAYYAVEKA QLESSDSMTL KNYERRLHEI NTLDWEELVV PDDPRKLSAP 240 DGGKTSCFEQ QNQFGTNGFM SSGTILSANN LPTGNSFVSQ SETVDQINSI HLNTSDNLCF 300 QRMEGQTNSS FQKKDCQLMA LDTGDSLDIL GKDDLKTQDS FGRWMNSVMS DSPGSVDDPT 360 LVSSISTGHE SFTSPTMDHL QSSVPGQIFS ITDVSPAWAF PTEETKILIT GFFHGGHPQL 420 AKSNIYIVCG DACSPAEIVQ SGVFRCLVSS HAAGIVNLYL SFDGRNPISQ VMTFEYRTPL 480 MHTSIISADE KSKWEEFRIQ MRLAHLLFST SRNLSILSSK VSPNSLKEAK IFARKTSQFA 540 DGWAHMMESF ENNKISFQQA KDSLFELALK NRLHEWLLER VVEGHCKTSD YDDEGQGVIH 600 LCAILDYTWA VYPFAQSVLS LDYRDKFGWT ALHWAAYCGR EKMVAALLSA GAKPNLITDP 660 NSENPDGCIP ADLASKKGYD GLAAYLAEKA LVQHFKDMTI AGNVSGALQI STPDSVNVGN 720 ISEEELYLKD TLTAYRTAAD AATRIQAAFR ERSFKLQSKA VEVSNPENEA RNIIAAMKIQ 780 HAFRNYETRK KMAAAGRIQH RFRTWKIRKE FLNMRRQAIK IQAVFRGYQV RRQYQKIVWS 840 VGVLEKVILR WRLKRKGFRG LQVSPVEAMN NQKQESEVEE EFFRASRKQA EERVERSVVR 900 VQAMFRSRRA QEEYHRMKLA HNEATLQYEG LASPDNNMG

Sequence ? help Back to Top

Protein Sequence Length: 939 aa Download sequence

MIGLSVLRSS QMESAVPGRL AGSEIHGFHT MEDLDVGNIM EEAKARWLRP NEIHAILCNY  60
KYFSVYVKPV TLPKSGTIVL FDRKMLRNFR KDGHNWKKKK DGKTVKEAHE HLKVGDEERI  120
HVYYAHGEDY PTFVRRCYWL LDKALEHVVL VHYRETQEGS PVTPVDSNSS SGPSDPSASW  180
ILSEETNSAA DPAYYAVEKA QLESSDSMTL KNYERRLHEI NTLDWEELVV PDDPRKLSAP  240
DGGKTSCFEQ QNQFGTNGFM SSGTILSANN LPTGNSFVSQ SETVDQINSI HLNTSDNLCF  300
QRMEGQTNSS FQKKDCQLMA LDTGDSLDIL GKDDLKTQDS FGRWMNSVMS DSPGSVDDPT  360
LVSSISTGHE SFTSPTMDHL QSSVPGQIFS ITDVSPAWAF PTEETKILIT GFFHGGHPQL  420
AKSNIYIVCG DACSPAEIVQ SGVFRCLVSS HAAGIVNLYL SFDGRNPISQ VMTFEYRTPL  480
MHTSIISADE KSKWEEFRIQ MRLAHLLFST SRNLSILSSK VSPNSLKEAK IFARKTSQFA  540
DGWAHMMESF ENNKISFQQA KDSLFELALK NRLHEWLLER VVEGHCKTSD YDDEGQGVIH  600
LCAILDYTWA VYPFAQSVLS LDYRDKFGWT ALHWAAYCGR EKMVAALLSA GAKPNLITDP  660
NSENPDGCIP ADLASKKGYD GLAAYLAEKA LVQHFKDMTI AGNVSGALQI STPDSVNVGN  720
ISEEELYLKD TLTAYRTAAD AATRIQAAFR ERSFKLQSKA VEVSNPENEA RNIIAAMKIQ  780
HAFRNYETRK KMAAAGRIQH RFRTWKIRKE FLNMRRQAIK IQAVFRGYQV RRQYQKIVWS  840
VGVLEKVILR WRLKRKGFRG LQVSPVEAMN NQKQESEVEE EFFRASRKQA EERVERSVVR  900
VQAMFRSRRA QEEYHRMKLA HNEATLQYEG LASPDNNMG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein