PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028075265.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 219aa MW: 25542.7 Da PI: 9.8444 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 97.1 | 7.6e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien +nrqvtfskR+ng+lKKA+ELSvLCdaevaviifs++g+ly++ss XP_028075265.1 9 KRIENVTNRQVTFSKRKNGLLKKAYELSVLCDAEVAVIIFSQKGRLYDFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 59.7 | 1.2e-20 | 99 | 179 | 5 | 85 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkek 85 +++ +ee+ +++l++e++ + ++i+ ++ qR++lG+dL s+s++eL+++ +qLe+sl+++R++K+ l++eqi++l++k XP_028075265.1 99 TNNPNEEQFTQQLEHEATIMSQKIKIIEAHQRKFLGQDLASCSVEELREIGSQLEQSLRSVRARKELLFKEQIDRLKEKCA 179 344489999********************************************************************9965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MVRGKVQLKR IENVTNRQVT FSKRKNGLLK KAYELSVLCD AEVAVIIFSQ KGRLYDFSSS 60 KSRATRKLNC LLYLFTWSIY YPMQKTIERY GEHVKMVQTN NPNEEQFTQQ LEHEATIMSQ 120 KIKIIEAHQR KFLGQDLASC SVEELREIGS QLEQSLRSVR ARKELLFKEQ IDRLKEKCAE 180 KPWQLQPAKE KEVAMSSRSS LSSEMVETEL FIGLPLMRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62165.3 | 2e-64 | MIKC_MADS family protein |