PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028075263.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 233aa MW: 27246.6 Da PI: 9.6924 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 96.9 | 8.4e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien +nrqvtfskR+ng+lKKA+ELSvLCdaevaviifs++g+ly++ss XP_028075263.1 9 KRIENVTNRQVTFSKRKNGLLKKAYELSVLCDAEVAVIIFSQKGRLYDFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 69.6 | 1e-23 | 99 | 194 | 5 | 100 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++ +ee+ +++l++e++ + ++i+ ++ qR++lG+dL s+s++eL+++ +qLe+sl+++R++K+ l++eqi++l++ke+ l een +L++k + XP_028075263.1 99 TNNPNEEQFTQQLEHEATIMSQKIKIIEAHQRKFLGQDLASCSVEELREIGSQLEQSLRSVRARKELLFKEQIDRLKEKERLLLEENAKLHEKCA 193 344489999***********************************************************************************987 PP K-box 100 e 100 e XP_028075263.1 194 E 194 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MVRGKVQLKR IENVTNRQVT FSKRKNGLLK KAYELSVLCD AEVAVIIFSQ KGRLYDFSSS 60 KSRATRKLNC LLYLFTWSIY YPMQKTIERY GEHVKMVQTN NPNEEQFTQQ LEHEATIMSQ 120 KIKIIEAHQR KFLGQDLASC SVEELREIGS QLEQSLRSVR ARKELLFKEQ IDRLKEKERL 180 LLEENAKLHE KCAEKPWQLQ PAKEKEVAMS SRSSLSSEMV ETELFIGLPL MRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62165.3 | 4e-68 | MIKC_MADS family protein |