PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028075084.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 250aa MW: 27682.1 Da PI: 6.4068 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.6 | 2.6e-17 | 122 | 171 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+++AeIrd + ng r++lg+f++ae Aa a+++a+ + +g XP_028075084.1 122 YRGVRRRP-WGKFAAEIRDSTRNG--IRVWLGTFDSAEAAALAYDQAAFSTRG 171 9*******.**********44465..**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MHIVQLQTNY NFCQREREKV ENSILHSPIH NSNMDSNFIQ LFPNSNQSFS LDELLHYHNS 60 LPFDVNDSEE MLLFGVLAEG ASMDHSSSET ASSAATGGGG VKEEEVTSIA ASEEEPKKEK 120 AYRGVRRRPW GKFAAEIRDS TRNGIRVWLG TFDSAEAAAL AYDQAAFSTR GAMAVLNFPV 180 ERVRESLRDI KCGGGGEEEG CSPVVALKKR HSMRKKSLVA KKKNKVKDKV VVVLEDLGAE 240 YLEQLLSNSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 4e-44 | ERF family protein |