PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028075015.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 198aa MW: 21624.2 Da PI: 9.8205 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65 | 1.5e-20 | 61 | 112 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+G+r+++ +g+++AeIrdp+ ng +r +lg+f taeeAa+a+++a+ +l+g+ XP_028075015.1 61 KYRGIRRRP-WGKYAAEIRDPTRNG--ARLWLGTFETAEEAARAYDRAAYELRGH 112 8********.**********98887..**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MPNHTYNTHL PYNITILEAR SKNRRLTLGL ATKIKMEGVN QQGGKKTENK GRGGGGGGEA 60 KYRGIRRRPW GKYAAEIRDP TRNGARLWLG TFETAEEAAR AYDRAAYELR GHQAILNFPN 120 EFHFTNPGSG PGLARSTVAV SSSVCSSSSS ANAGREGLEM GGGGGEGVLE FECFDNELLE 180 ELLGNKEEGR EKKRPRIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 4e-23 | ERF family protein |