PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028074394.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 254aa    MW: 29417 Da    PI: 6.4248
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028074394.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR181.71.2e-2578168190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +fY +Y++++GF+vr++++++s+ n+ ++ ++fvCskeg+re++    +++   + + tr gC a+l+v +++ +kw++tk++++HnH+l+
  XP_028074394.1  78 EFYVAYGRHTGFTVRIHHNRRSRINNMVIGQDFVCSKEGYREKKYACrKDRVLPPPPITREGCPAMLRVALRDGAKWVITKFVKDHNHSLM 168
                     6*****************************************998772233334899********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MESTSSEAFD LDEGESCFPV ESYNQNDFTD DELSKSMDMC IGKDDKKIDQ SVGNLASVDN  60
AVEPHIGLEF NSRDEAREFY VAYGRHTGFT VRIHHNRRSR INNMVIGQDF VCSKEGYREK  120
KYACRKDRVL PPPPITREGC PAMLRVALRD GAKWVITKFV KDHNHSLMSP SKVPWRGSGK  180
NLVSEDEKDQ RIRELKLELY NEKQRCKRRC AGYQEQLHMV LKYVEEHAEH LSRSVQDMVQ  240
RIKELENEQL DGSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.12e-37FAR1 family protein