PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028073831.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GRF

Protein Properties

Length: 596aa MW: 64796.9 Da PI: 9.0777

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028073831.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.6	2.5e-24	216	260	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e XP_028073831.1 216 DPEPGRCRRTDGKKWRCSRDAVADQKYCERHINRGRHRSRKPVEG 260 79****************************************985 PP
2	QLQ	59.6	8.8e-21	146	182	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+ +L++Q+l+yKy++an+PvP++Ll+a++k XP_028073831.1 146 GPFTPSQWIELEHQALIYKYIMANVPVPSNLLFALKK 182 59*******************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 596 aa Download sequence
MDFGSVGLEG LVGPENRVSS QLVSDHESTK PKSNNGSGFL KQERSRSGED DWRSSKAART 60 DDSELPNTLL HLQGTPLLPR SNPMHSCNDS GQQQNMLCFS EAPFLSKNGG FAERTTHNNS 120 PFRYYAGYGS GGLNSGMHTP VLGTRGPFTP SQWIELEHQA LIYKYIMANV PVPSNLLFAL 180 KKSLDPYGLS GLSSGSYAPN SFGRGSFHLG FSGNTDPEPG RCRRTDGKKW RCSRDAVADQ 240 KYCERHINRG RHRSRKPVEG QTGQVVSGFT TKVVPIAGST SASAMSSSGA SNSLGVAVQH 300 QFKGLRPDAE KNPSADVLVN RMQGPQVLSM VSTTTNLKSK DSPFSIPKQH IPNEQFSYSE 360 FGLVSSDSLL NPSQKSSGNS RNYNSILNFN NHYSHDQHLP LHHFIDDWPK GQSNRATVAW 420 PEELKPDWTQ LSMSIPMASS DFSSTSTSSP QEKIALSPLR LSRELDPIQM GLAVNNNHLT 480 ESTQKGTNWV PISWGSSIGG PLGEVLHSSS STVGAWKNLS DLNLTNRWNG SPQLGSSPTG 540 VLQKMTFVSL SNSSSGLSSP RVDYKKSNET GSLGDDILGS TLASSFPFHR CNERVT

Sequence ? help Back to Top

Protein Sequence Length: 596 aa Download sequence

MDFGSVGLEG LVGPENRVSS QLVSDHESTK PKSNNGSGFL KQERSRSGED DWRSSKAART  60
DDSELPNTLL HLQGTPLLPR SNPMHSCNDS GQQQNMLCFS EAPFLSKNGG FAERTTHNNS  120
PFRYYAGYGS GGLNSGMHTP VLGTRGPFTP SQWIELEHQA LIYKYIMANV PVPSNLLFAL  180
KKSLDPYGLS GLSSGSYAPN SFGRGSFHLG FSGNTDPEPG RCRRTDGKKW RCSRDAVADQ  240
KYCERHINRG RHRSRKPVEG QTGQVVSGFT TKVVPIAGST SASAMSSSGA SNSLGVAVQH  300
QFKGLRPDAE KNPSADVLVN RMQGPQVLSM VSTTTNLKSK DSPFSIPKQH IPNEQFSYSE  360
FGLVSSDSLL NPSQKSSGNS RNYNSILNFN NHYSHDQHLP LHHFIDDWPK GQSNRATVAW  420
PEELKPDWTQ LSMSIPMASS DFSSTSTSSP QEKIALSPLR LSRELDPIQM GLAVNNNHLT  480
ESTQKGTNWV PISWGSSIGG PLGEVLHSSS STVGAWKNLS DLNLTNRWNG SPQLGSSPTG  540
VLQKMTFVSL SNSSSGLSSP RVDYKKSNET GSLGDDILGS TLASSFPFHR CNERVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	1e-113	GRF family protein