PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028073790.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 277aa    MW: 31943.3 Da    PI: 7.1792
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028073790.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR146.98.9e-1549135291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fY +YAk++GF +  ++++ + ++ge++     C+   +r ++++   +  +++  ++++Cka+++ +++kdg++++t+++leH+H+l p
  XP_028073790.1  49 FYTKYAKQLGFAIAYRTQNVT-TDGEVKYFGIECTWARNRIKRSEV--NPLEPSLPSKIDCKARVRATLQKDGRYKLTTVVLEHTHDLIP 135
                     9************99988877.8999********999988887766..8999***********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MDIDSMNNSF NVSKEVEEQD NNVEFNESGE IEEPKKGMYF ISKQEVYTFY TKYAKQLGFA  60
IAYRTQNVTT DGEVKYFGIE CTWARNRIKR SEVNPLEPSL PSKIDCKARV RATLQKDGRY  120
KLTTVVLEHT HDLIPTDSRH FPMNKRILTL VKKRLEVNDA AGIGVARNFH SIVVEAGGYE  180
ALMFDEQDAR KYIQNARRLR LGVGDAESVT FYFHKSQQQN LNFYSAIDLD EDGYMRNLFW  240
AHAKLVLRTC ETCFGQMQGV GRLINHLEML SLLTQPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.11e-24FAR1 family protein