PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028073566.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WOX

Protein Properties

Length: 368aa MW: 40743.4 Da PI: 7.165

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028073566.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56	6.8e-18	62	122	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p +ee++++ ++l ++ +++V++WFqNr+ + k+ XP_028073566.1 62 KPRWNPKPEQIRILESIFNSgMVNPPREEIRKIRTQLqeygQVGDANVFYWFQNRKSRSKH 122 89***************99***********************************995 PP
2	Wus_type_Homeobox	112.5	2.3e-36	61	124	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW+P+peQi+iLe++++sG+++P++eei++i+++L+eyG+++d+NVfyWFQNrk+R+++kq XP_028073566.1 61 PKPRWNPKPEQIRILESIFNSGMVNPPREEIRKIRTQLQEYGQVGDANVFYWFQNRKSRSKHKQ 124 579***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MASSNRHWPS MFKSKPCNTH HHLHQWHHHD LNNPALISTG FHTALHTSPS VAGSEERSPD 60 PKPRWNPKPE QIRILESIFN SGMVNPPREE IRKIRTQLQE YGQVGDANVF YWFQNRKSRS 120 KHKQQRHLQN TKPNTATAPS SSSSSSEKSS PQSSADNIAF SVGTNSPTAS VNKTYFQNPA 180 EFLPEPYFLP VQQGSGGEAS NYVLSQGFCF PELSNNMVHV PNNTDQSVGN CCGFLLSELM 240 MNHGSPKRVE DEKLKPQEQL NYTATHPIVP STINHILGAG TVVGESSGTV SEARSTVFIN 300 DVAFEVAVGP FNVREAFGDD AMLIHSTGQP VVTNEWGVTL QSLQHGGFYY LVRTLTPINT 360 VSETQLII

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MASSNRHWPS MFKSKPCNTH HHLHQWHHHD LNNPALISTG FHTALHTSPS VAGSEERSPD  60
PKPRWNPKPE QIRILESIFN SGMVNPPREE IRKIRTQLQE YGQVGDANVF YWFQNRKSRS  120
KHKQQRHLQN TKPNTATAPS SSSSSSEKSS PQSSADNIAF SVGTNSPTAS VNKTYFQNPA  180
EFLPEPYFLP VQQGSGGEAS NYVLSQGFCF PELSNNMVHV PNNTDQSVGN CCGFLLSELM  240
MNHGSPKRVE DEKLKPQEQL NYTATHPIVP STINHILGAG TVVGESSGTV SEARSTVFIN  300
DVAFEVAVGP FNVREAFGDD AMLIHSTGQP VVTNEWGVTL QSLQHGGFYY LVRTLTPINT  360
VSETQLII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	1e-82	WOX family protein