PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028073244.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 268aa    MW: 29344.2 Da    PI: 7.29
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028073244.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.0003697119123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_028073244.1  97 FSCNYCQRKFFSSQALGGHQNAH 119
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MEPLTKKPCP FEASSFINTP EATSMENPKE DAQEKREQQE DQELERITDP KIDLKLSCKD  60
SNDVCNPELN LLDCLNMGSA QISSGAPHMP DAEPRVFSCN YCQRKFFSSQ ALGGHQNAHK  120
RERTLAKRGL KIGSPLGHSY LHHYPSMASL PLHGGPLGIQ VHSMIHKPSY IPSSSGIRGM  180
YGQNGWLRLP IDQQPTIGKL AVDNYQASAA TEPSSRGGIG RFGTVRMMTG SPADEVIGGS  240
YWWAGGGVGG HLKTNQDEMQ KLDLSLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.18e-47C2H2 family protein