PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028073018.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HSF

Protein Properties

Length: 355aa MW: 39617.5 Da PI: 8.3803

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028073018.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.2	8.8e-36	25	117	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d+++++++sw e+ +fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ Fkkg+k+ll++ XP_028073018.1 25 FLTKTYQLVDDPTTDHIVSWGEDDATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFKKGEKHLLCE 110 9***************************************************************99.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r+k++ XP_028073018.1 111 IHRRKTS 117 **987 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MALMLDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPTTDH IVSWGEDDAT FVVWRPPEFA 60 RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKHLLCE IHRRKTSQPP 120 QVAFNHHLNH PHSPMGGRVS VPYPTRVSIS PPDSDDQANW CDSPPPTART GFSAVAGGGC 180 GGYNNNNSVA ALSEDNQRLR RSNSILVSEL AHMRKLYNDI IYFVQNHVKP VAPSNAFFNS 240 SSSSPSCATP INASMVQQKP LNHLIGYHQS SPKQAPQFQA MGSFNSTNTN SPSHSSLTML 300 ENPDGNSTRT KLFGVPLQSR KRLHPEYSSS IETNKARLVL EKDDLGLNLM PPSPC

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MALMLDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPTTDH IVSWGEDDAT FVVWRPPEFA  60
RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKHLLCE IHRRKTSQPP  120
QVAFNHHLNH PHSPMGGRVS VPYPTRVSIS PPDSDDQANW CDSPPPTART GFSAVAGGGC  180
GGYNNNNSVA ALSEDNQRLR RSNSILVSEL AHMRKLYNDI IYFVQNHVKP VAPSNAFFNS  240
SSSSPSCATP INASMVQQKP LNHLIGYHQS SPKQAPQFQA MGSFNSTNTN SPSHSSLTML  300
ENPDGNSTRT KLFGVPLQSR KRLHPEYSSS IETNKARLVL EKDDLGLNLM PPSPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	1e-105	HSF family protein