PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028072795.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family BES1
Protein Properties Length: 323aa    MW: 34713.6 Da    PI: 7.7925
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028072795.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822210.54.5e-6521451148
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     ++++r ptwkErEnnkrRERrRRaiaakiyaGLR++Gnyklpk++DnneVlkALcreAGw+ve+DGttyrkg+kp e++e++g sasasp+ss+q
  XP_028072795.1   2 TSGTRLPTWKERENNKRRERRRRAIAAKIYAGLRMYGNYKLPKHCDNNEVLKALCREAGWIVEEDGTTYRKGYKPVEHMEIMGGSASASPCSSYQ 96 
                     5899******************************************************************************************* PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvss 148
                             +sp++sy++sp+ ssfpsp s+  + +a +    +sl+p+l++ls+  s
  XP_028072795.1  97 --------PSPCASYNPSPTPSSFPSPISSPYAANAISngdaNSLIPWLKNLSSGGS 145
                     ........9****************99776543332223466*********998544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MTSGTRLPTW KERENNKRRE RRRRAIAAKI YAGLRMYGNY KLPKHCDNNE VLKALCREAG  60
WIVEEDGTTY RKGYKPVEHM EIMGGSASAS PCSSYQPSPC ASYNPSPTPS SFPSPISSPY  120
AANAISNGDA NSLIPWLKNL SSGGSSKLPH HLYIHGSSIS APVTPPLSSP TARTPRMNDN  180
WDDRTASAPW AAQHQTFLPS STPQSPGYQT PPDSGWLSGV QTPQDGPSSP TFSLVASNPF  240
GFKEAFLGGG SRMWTPGQSG TCSPAIAAGC DQTSDVPMSD GIAAEFAFGS NTKGLVKAWE  300
GERIHEECLG DDLELTLGNS TTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-130BES1 family protein