PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028072778.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | WRKY | ||||||||
Protein Properties | Length: 268aa MW: 29605.7 Da PI: 5.6358 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96 | 2.5e-30 | 75 | 133 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp++v++tY+ eHnh XP_028072778.1 75 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSHVDPTMVVVTYSCEHNHA 133 69*************************998****************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MEGRFSNHPF INEQEDIENS PENSEDTLRS GMLNDTKTTS TSSPKRRRAA QKRVVSIPIG 60 DIEGSRLKGE SAPPSDSWAW RKYGQKPIKG SPYPRGYYRC SSSKGCPARK QVERSHVDPT 120 MVVVTYSCEH NHALPASKNN HHQNHQQPTI ISATTPAAAE AATPVSPPLL FDNLGEEESQ 180 INAYQFEWFS HLESVSSTVL ESPMLDSGGG GSGGDGALIF TIREEDESLF GDLGELPECA 240 VVFRRGVRER EEEERRRCNL APWCGTTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29280.1 | 8e-67 | WRKY family protein |