PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028072708.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 239aa MW: 27444.4 Da PI: 8.4675 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.4 | 5e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr g+lKKA+ELSvLCdaeva+iifs++gklye+s+ XP_028072708.1 9 KRIENATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIIFSPKGKLYEFSN 59 79***********************************************95 PP | |||||||
2 | K-box | 75.1 | 1.9e-25 | 78 | 172 | 5 | 99 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 s++++++++ ++l++e+ L ++ie Lq ++R+llG++Les + eLqq+++q+e+sl+kiR++K+++++e+ie+l++ e+ l een +Lr+kl+ XP_028072708.1 78 SSNNAAQENLQHLKEEAVSLSEKIELLQVSKRKLLGDGLESSCIDELQQVQDQIEQSLSKIRARKTQVFKEKIEQLKEEERILTEENAKLREKLK 172 455689999***********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MVRGKTQMKR IENATSRQVT FSKRRSGLLK KAFELSVLCD AEVALIIFSP KGKLYEFSNS 60 SINKTIDRYQ KNAKDLGSSN NAAQENLQHL KEEAVSLSEK IELLQVSKRK LLGDGLESSC 120 IDELQQVQDQ IEQSLSKIRA RKTQVFKEKI EQLKEEERIL TEENAKLREK LKCDQMELPC 180 LAFAQEVPTQ REISDVETEL FIGPPDEQRT TRWLIQSSTA INGMRLRYKK PESFPGFEC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 1e-78 | MIKC_MADS family protein |