PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028072434.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HSF

Protein Properties

Length: 513aa MW: 56783.4 Da PI: 4.5207

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028072434.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.4	7.3e-36	35	126	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+y++++d+++++++sws+++nsfvv+d+ efa+++Lpk+Fkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++ XP_028072434.1 35 FLVKTYDMVDDPSTDKIVSWSATNNSFVVWDPPEFARDLLPKFFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQKHLLKS 120 9******************999*************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i r+k XP_028072434.1 121 ISRRKP 126 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MDAVNSGTTA ANGGAALPPP PAPMPIPNAN APPPFLVKTY DMVDDPSTDK IVSWSATNNS 60 FVVWDPPEFA RDLLPKFFKH NNFSSFVRQL NTYGFRKVDP DRWEFANEGF LRGQKHLLKS 120 ISRRKPAHGN NNQQQQQPHG QSASIAACVE VGKFGLEEEV ERLKRDKNVL MQELVRLRQQ 180 QQSTDNQLQA MVQRLQGMEQ RQQQMMSFLA KAVHSPGFLA QFVQQQQNES NRRISEGNKK 240 RRLKQDGISD DHSVGPIDGQ IVKYQPMMNE AAKAMLRQIV KLDAPMRLEN FNNDSDAFLI 300 GDVSLPNTLD RGSSSTPTSG LTLQEVSPSS GQSYLPVTSG ISGAKSEIQS SSLCANSEMI 360 TTPFPTMNPL VGAQAHADLV MPELSPLQEM MSESNVDVSG ESYIGPETQS SAFINSTSKM 420 PLEIDNFATD PEFEWDDSLL EDEIQKLPGI GDPFWEQFLA SPQPGETEMD STSLEAPTEG 480 SEAKPLENGW NKTQHVEQLT EQMGLLTSDN QEV

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MDAVNSGTTA ANGGAALPPP PAPMPIPNAN APPPFLVKTY DMVDDPSTDK IVSWSATNNS  60
FVVWDPPEFA RDLLPKFFKH NNFSSFVRQL NTYGFRKVDP DRWEFANEGF LRGQKHLLKS  120
ISRRKPAHGN NNQQQQQPHG QSASIAACVE VGKFGLEEEV ERLKRDKNVL MQELVRLRQQ  180
QQSTDNQLQA MVQRLQGMEQ RQQQMMSFLA KAVHSPGFLA QFVQQQQNES NRRISEGNKK  240
RRLKQDGISD DHSVGPIDGQ IVKYQPMMNE AAKAMLRQIV KLDAPMRLEN FNNDSDAFLI  300
GDVSLPNTLD RGSSSTPTSG LTLQEVSPSS GQSYLPVTSG ISGAKSEIQS SSLCANSEMI  360
TTPFPTMNPL VGAQAHADLV MPELSPLQEM MSESNVDVSG ESYIGPETQS SAFINSTSKM  420
PLEIDNFATD PEFEWDDSLL EDEIQKLPGI GDPFWEQFLA SPQPGETEMD STSLEAPTEG  480
SEAKPLENGW NKTQHVEQLT EQMGLLTSDN QEV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	238	245	NKKRRLKQ
2	239	244	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-127	HSF family protein