PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028072403.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 315aa    MW: 35984.8 Da    PI: 10.826
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028072403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.73.3e-1666151191
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     ffkvl     ++++ l++p  f+++++g+   +k   +e  sg +sWevk+  + ++++++  +GW++ v++n+L+ gDfvvF+l+++s f+
  XP_028072403.1  66 FFKVL--IGDFANK-LRIPPAFVAKMEGE--LPKNALIEANSGeQSWEVKI-QQIGDEHCFTHRGWEKLVNDNHLRFGDFVVFRLISDSMFH 151
                     67777..6667776.9**********877..6667888887777*******.35555557777***********************987774 PP
2B345.31.6e-142253101096
                     HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                       +++rl++pk fa e g+   ++k ++l++++g+ W v ++ r  + r + +t+GW +F  an+++ gD+++Fk++ +s+   +v v
  XP_028072403.1 225 KYNKSRLTVPKAFAVESGIG--RKKVVVLKNKKGQLWAVDICLRPPPYRtVDFTAGWPDFRVANNIEIGDTCLFKFIPSSGNVIHVEV 310
                     456689********999866..6679***************99888888689***********************9977777666666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MPASVTCRAV IRRLFISTHY GGCRAVLRIS ISFLRFTFQI QRERKEEKKK KKGPKMGRKP  60
KHCSSFFKVL IGDFANKLRI PPAFVAKMEG ELPKNALIEA NSGEQSWEVK IQQIGDEHCF  120
THRGWEKLVN DNHLRFGDFV VFRLISDSMF HIVTYGPSGC EKELNPSIKK IPQNPFMSRN  180
TRSRKSMDSP SHPYGRRSNR GEVEARGWSA SAKPTHLSFL MVLKKYNKSR LTVPKAFAVE  240
SGIGRKKVVV LKNKKGQLWA VDICLRPPPY RTVDFTAGWP DFRVANNIEI GDTCLFKFIP  300
SSGNVIHVEV QRNYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24645.11e-23B3 family protein