PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028072400.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 312aa    MW: 35828.8 Da    PI: 5.6898
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028072400.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3382.9e-123702598
                    TT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3 25 ehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                    +hg++      + l+ +sg +W+v+l   ++ ++++l++GWk+F +   ++ g  +vF++dg+s+f  +v +f+
  XP_028072400.1  3 KHGKN--LANLVFLNVPSGAVWKVEL--MNSNEEVWLSNGWKDFTQYYSIRFGHLLVFRYDGNSNF--HVIIFD 70
                    55544..555688888**********..9999******************************9999..998887 PP
2B357.52.4e-18217310199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     f   + ps+v  + +l +p  fa +h ++k++  +++l+ ++gr W+v++ y   +++++     GW +Fv++n+Lk+gD+++F+l++ +e  l+
  XP_028072400.1 217 FMVSMHPSYVCFRFNLNVPLAFAMKHFSVKQR--DVILRLSDGRAWTVNC-YchLNGKCK----FGWASFVRDNNLKVGDVCIFELIDATEVCLN 304
                     6677899*******************988655..799999**********.424555544....59*********************9988889* PP

                     EEEE-S CS
              B3  94 vkvfrk 99 
                     v++fr+
  XP_028072400.1 305 VTIFRA 310
                     **9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MTKHGKNLAN LVFLNVPSGA VWKVELMNSN EEVWLSNGWK DFTQYYSIRF GHLLVFRYDG  60
NSNFHVIIFD MSASEIEYPS NPTQKLQLLE TEEDIEIDDS VEILEDFPTQ QTKVEEVSET  120
DELERDSSIE ILDVFPKCQT SRAADMEKDG SVEVKRSNLR CKMENFDGFK LPNLKNDVKP  180
PCLTREIKKE HSGGTSIDGK ARALQRAKAF KSENPFFMVS MHPSYVCFRF NLNVPLAFAM  240
KHFSVKQRDV ILRLSDGRAW TVNCYCHLNG KCKFGWASFV RDNNLKVGDV CIFELIDATE  300
VCLNVTIFRA VY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-32B3 family protein