PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028072361.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | WOX | ||||||||
Protein Properties | Length: 169aa MW: 19173.8 Da PI: 9.6741 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.1 | 1.9e-20 | 26 | 87 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t eq+++L +lF+ r+ps++++++++++l +++ ++V++WFqN++a+e++ XP_028072361.1 26 KCGRWNPTVEQVKVLTDLFRAgLRTPSTDQIQKISSQLsfygKIESKNVFYWFQNHKARERQ 87 568*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 112.7 | 1.9e-36 | 26 | 89 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt eQ+k+L++l+++GlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ XP_028072361.1 26 KCGRWNPTVEQVKVLTDLFRAGLRTPSTDQIQKISSQLSFYGKIESKNVFYWFQNHKARERQKR 89 578***********************************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MDDIGMSGFC VKPRCGGGNG GGAGNKCGRW NPTVEQVKVL TDLFRAGLRT PSTDQIQKIS 60 SQLSFYGKIE SKNVFYWFQN HKARERQKRR RVSVTEQHEI HREDRVSVSS AKHLVSINQV 120 SGPERAMETL QLFPLNSFSE SDSEKLRLFA NECKAEMNHP PLDLRLSFM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 88 | 92 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11260.1 | 3e-56 | WOX family protein |