PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028072247.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GeBP

Protein Properties

Length: 371aa MW: 41163 Da PI: 8.3594

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028072247.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	83.9	2.3e-26	91	185	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 +f+r+w+e Dei +LqGl+d+ +++ s d++ f+ ++++ +s ++ksql+eK+rrL+kKf+ +++ ++g ++++ ++hd+ f lsk++W XP_028072247.1 91 KFHRIWTEPDEIRFLQGLLDCSSERL-SFPRDLNVFFATFSDTMSQPYTKSQLSEKLRRLRKKFRVISSRLARGLDKALLSPHDRALFYLSKQLW 184 699****************88876.7778************************************************************** PP DUF573 97 g 97 + XP_028072247.1 185 H 185 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MDSTPNPTFI SQPNHNHPHH LSIKASASKL PIKRKTPETS SSSSNPNPNP NPNLSPILPP 60 KLEPATTDDG GSGGDDNDDV GGADRNPPPF KFHRIWTEPD EIRFLQGLLD CSSERLSFPR 120 DLNVFFATFS DTMSQPYTKS QLSEKLRRLR KKFRVISSRL ARGLDKALLS PHDRALFYLS 180 KQLWHPEFSS TSPFGASNKQ KKSNLVRVKV RFSPTLPSAL IPASNQPITY ELNDHSVLNC 240 IGNDQNDEDG GDDRVFVGGS DVKLSEVNVE FDGGVREQEL PMSSGSGGGG DGGRCDSETG 300 LRQVVAKTVI NVFDQCLKEV KMALVRHHGS GTQAGSSKDD FEKRWREQRV AELDLLARRL 360 RLIHEHSLHR Q

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MDSTPNPTFI SQPNHNHPHH LSIKASASKL PIKRKTPETS SSSSNPNPNP NPNLSPILPP  60
KLEPATTDDG GSGGDDNDDV GGADRNPPPF KFHRIWTEPD EIRFLQGLLD CSSERLSFPR  120
DLNVFFATFS DTMSQPYTKS QLSEKLRRLR KKFRVISSRL ARGLDKALLS PHDRALFYLS  180
KQLWHPEFSS TSPFGASNKQ KKSNLVRVKV RFSPTLPSAL IPASNQPITY ELNDHSVLNC  240
IGNDQNDEDG GDDRVFVGGS DVKLSEVNVE FDGGVREQEL PMSSGSGGGG DGGRCDSETG  300
LRQVVAKTVI NVFDQCLKEV KMALVRHHGS GTQAGSSKDD FEKRWREQRV AELDLLARRL  360
RLIHEHSLHR Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	2e-16	GeBP family protein