PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028072046.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 280aa    MW: 31090.1 Da    PI: 6.671
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028072046.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.21.4e-15225260134
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C++Cg ++  Tp++Rrgp+g++tLCnaCGl+++ k+
  XP_028072046.1 225 CRHCGISErsTPMMRRGPEGPRTLCNACGLMWANKN 260
                     *****99999**********************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MDNSIHGSLH NVHYLQEHDD DHHHDVLQHM RNGNGLDNNE HDDNDGNGGE SEGMEGDIQV  60
HPDTRNLSDN QNGLVARGGN ENNNNQLTLS FQGQVYVFDS VSPEKVQAVL LLLGGREIPP  120
TSMPTVPIST HQNTRGLSST PEHCSVPHRL ASLIRFRAKR KERNFDKKIR YTVRKEVAIR  180
MQRNKGQFTS SKPNHDDCAS AVTSWDSNQS WGLDGSGSQQ QEIVCRHCGI SERSTPMMRR  240
GPEGPRTLCN ACGLMWANKN GNFDADQMVC RIAGNGSDSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.24e-96GATA family protein