PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028072044.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 303aa    MW: 33496.8 Da    PI: 6.6715
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028072044.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.82.3e-16225261135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg ++  Tp++Rrgp+g++tLCnaCGl+++ kg+
  XP_028072044.1 225 CRHCGISErsTPMMRRGPEGPRTLCNACGLMWANKGT 261
                     *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MDNSIHGSLH NVHYLQEHDD DHHHDVLQHM RNGNGLDNNE HDDNDGNGGE SEGMEGDIQV  60
HPDTRNLSDN QNGLVARGGN ENNNNQLTLS FQGQVYVFDS VSPEKVQAVL LLLGGREIPP  120
TSMPTVPIST HQNTRGLSST PEHCSVPHRL ASLIRFRAKR KERNFDKKIR YTVRKEVAIR  180
MQRNKGQFTS SKPNHDDCAS AVTSWDSNQS WGLDGSGSQQ QEIVCRHCGI SERSTPMMRR  240
GPEGPRTLCN ACGLMWANKG TLRDLSKAAP QLGQNPSLSQ NENGNFDADQ MVCRIAGNGS  300
DSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-109GATA family protein