PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028071913.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family SBP
Protein Properties Length: 408aa    MW: 45070.6 Da    PI: 6.9211
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028071913.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP128.82.1e-40174250177
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                     +Cqv+gC++ l +akeyhrrhkvCe+hskap+v v gleqrfCqqCsrfhe+sefD++krsCrrrLa+hnerrrk +
  XP_028071913.1 174 RCQVDGCNVALVNAKEYHRRHKVCEMHSKAPKVEVLGLEQRFCQQCSRFHEVSEFDDSKRSCRRRLAGHNERRRKGS 250
                     6*************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    
MENGWSLFNT SITATTNTST TNNSTTTTSS SSRGHNGHCN NLAWDIWDMG TSRFDWNTTS  60
STSFLHHHHQ QQHQQQPPSS ATVTAASEAH ALMLGHQTAA SLYSGAAGPH YYHPDPHLMC  120
LKLGKRHYFE DATGAPLGDC HVVGGGGGGK RGKTYYGGGG GGGEVVGTSA PAPRCQVDGC  180
NVALVNAKEY HRRHKVCEMH SKAPKVEVLG LEQRFCQQCS RFHEVSEFDD SKRSCRRRLA  240
GHNERRRKGS HDSIPRSPHP SLSHGRALSL LSSSWKNNSW FSSSDLSLRC SAALRELIAE  300
NRAAILARQL VLERDWHRGS HDTMDDVNAT QLAGTNPMTP HHHQMFPEPH GYWDRFNEGS  360
GHVTLDLMQA PSSAFGLLSV RGKSKEEEEE EEEEEEEEEC SGLWTHMV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27360.41e-36SBP family protein