PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028071913.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | SBP | ||||||||
Protein Properties | Length: 408aa MW: 45070.6 Da PI: 6.9211 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 128.8 | 2.1e-40 | 174 | 250 | 1 | 77 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv+gC++ l +akeyhrrhkvCe+hskap+v v gleqrfCqqCsrfhe+sefD++krsCrrrLa+hnerrrk + XP_028071913.1 174 RCQVDGCNVALVNAKEYHRRHKVCEMHSKAPKVEVLGLEQRFCQQCSRFHEVSEFDDSKRSCRRRLAGHNERRRKGS 250 6*************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 408 aa Download sequence |
MENGWSLFNT SITATTNTST TNNSTTTTSS SSRGHNGHCN NLAWDIWDMG TSRFDWNTTS 60 STSFLHHHHQ QQHQQQPPSS ATVTAASEAH ALMLGHQTAA SLYSGAAGPH YYHPDPHLMC 120 LKLGKRHYFE DATGAPLGDC HVVGGGGGGK RGKTYYGGGG GGGEVVGTSA PAPRCQVDGC 180 NVALVNAKEY HRRHKVCEMH SKAPKVEVLG LEQRFCQQCS RFHEVSEFDD SKRSCRRRLA 240 GHNERRRKGS HDSIPRSPHP SLSHGRALSL LSSSWKNNSW FSSSDLSLRC SAALRELIAE 300 NRAAILARQL VLERDWHRGS HDTMDDVNAT QLAGTNPMTP HHHQMFPEPH GYWDRFNEGS 360 GHVTLDLMQA PSSAFGLLSV RGKSKEEEEE EEEEEEEEEC SGLWTHMV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27360.4 | 1e-36 | SBP family protein |