PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028071909.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | SBP | ||||||||
Protein Properties | Length: 309aa MW: 34389.7 Da PI: 8.6696 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 129.8 | 9.7e-41 | 159 | 235 | 1 | 77 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cq+egC+adl++ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh lsefD++krsCr+rLa+hn+rrrk++ XP_028071909.1 159 RCQAEGCNADLTHAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRFHVLSEFDNGKRSCRKRLADHNRRRRKSH 235 6**************************************************************************86 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 309 aa Download sequence |
MLEYEWGNPS TVMHSGEEAT GDSDPNRQIF DHYAQAFNET LVNSTGFSQN QHHFHQPQQP 60 FHHPQTQAYS HSLYDPRAFG VSYAPPSPAM LSLDHVGGAT VEHGGYVVAP KSEPVADFAS 120 RIGLNLGGRT YFSSSEDDFV NRLYRRSRAV EPGSVNSPRC QAEGCNADLT HAKHYHRRHK 180 VCEFHSKAST VIAAGLTQRF CQQCSRFHVL SEFDNGKRSC RKRLADHNRR RRKSHHLPSQ 240 EPKSQLENAR TSSSDNPPRS PPDSGAHSSS SVTMAISPPR MSLDCFRQRS YQAATSSSPS 300 TSSLFFSNG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G02065.1 | 3e-81 | SBP family protein |