PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028071909.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family SBP
Protein Properties Length: 309aa    MW: 34389.7 Da    PI: 8.6696
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028071909.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP129.89.7e-41159235177
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                     +Cq+egC+adl++ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh lsefD++krsCr+rLa+hn+rrrk++
  XP_028071909.1 159 RCQAEGCNADLTHAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRFHVLSEFDNGKRSCRKRLADHNRRRRKSH 235
                     6**************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MLEYEWGNPS TVMHSGEEAT GDSDPNRQIF DHYAQAFNET LVNSTGFSQN QHHFHQPQQP  60
FHHPQTQAYS HSLYDPRAFG VSYAPPSPAM LSLDHVGGAT VEHGGYVVAP KSEPVADFAS  120
RIGLNLGGRT YFSSSEDDFV NRLYRRSRAV EPGSVNSPRC QAEGCNADLT HAKHYHRRHK  180
VCEFHSKAST VIAAGLTQRF CQQCSRFHVL SEFDNGKRSC RKRLADHNRR RRKSHHLPSQ  240
EPKSQLENAR TSSSDNPPRS PPDSGAHSSS SVTMAISPPR MSLDCFRQRS YQAATSSSPS  300
TSSLFFSNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02065.13e-81SBP family protein