PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028071856.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Nin-like
Protein Properties Length: 310aa    MW: 34804.5 Da    PI: 8.4548
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028071856.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK39.61.1e-12132174446
          RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 
                     ei l+d+ ++ +++i++AA +L+v+ ++LKr CR yG++ WP 
  XP_028071856.1 132 EIPLDDILQNSKKSIQAAADNLKVSRSTLKRVCRGYGVPSWPP 174
                     688999************************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MPPSNKDYGN QQTALRKILE TMKKNFQTFK LASGEELGEH LYIAEIHFQN GEKFDSVQMS  60
QTTKSLPRLE PLQSGGEMTQ LDLSNQQSMD ALNNESNVVS AERSNIDVTC SQEKGKTKRP  120
KRVHNKRGVK IEIPLDDILQ NSKKSIQAAA DNLKVSRSTL KRVCRGYGVP SWPPCKKNMV  180
GSFQPSESSP GVDHQQIPQL SFDLPFNQAS TTVVHANAHN IAIEDANSVT IRAKYINDIT  240
IRFRLSLSSG LVELQQQIAK RLRLEARSYY VKYKDEEDHV ILIACDDDLQ DCISTYKLLG  300
TSIVVLIDPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.14e-18Nin-like family protein