PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028070716.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 440aa MW: 49156.5 Da PI: 5.8062

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028070716.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.6	1.9e-07	378	411	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + XP_028070716.1 378 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 411 469*****************************87 PP
2	ELK	28.7	2.9e-10	332	353	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ XP_028070716.1 332 ELKHELKQGYKEKIVDIREEIL 353 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MAFPNHQSQE MAFSDQHLAE NTSVLRTILP EQLGQSAGNP QEHHHQPPQQ PPQQVGVGPT 60 WLNSAILRQQ NQYGDGNFLN LHTNSDSTTT SQQQQQGSNQ WLSRSILQRN EVQVSNDSMM 120 AAAAISHESA DLNNNKVENN GGEITGSDVR GGEGVMNWQS ARLKSEILAH PLYEQLLSAH 180 VACLRIATPV DQLPRIDAQL AQSQHVVGKY SGLGHGSIGD DKELDQFMNT SNHQYAYVLL 240 LCSFKEQLQQ HVRVHAMEAV MACWEIEQSL QSLTGVSPGE GTGATMSDDD DDQVDSDTNL 300 FDGSLEGADI LGFGPLVPTE SERSLMERVR QELKHELKQG YKEKIVDIRE EILRKRRAGK 360 LPGDTTSMLK AWWQSHSKWP YPTEEDKARL VQETGLQLKQ INNWFINQRK RNWHSNSSTS 420 TVLKSKRKSN AGDNSGDCFM

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MAFPNHQSQE MAFSDQHLAE NTSVLRTILP EQLGQSAGNP QEHHHQPPQQ PPQQVGVGPT  60
WLNSAILRQQ NQYGDGNFLN LHTNSDSTTT SQQQQQGSNQ WLSRSILQRN EVQVSNDSMM  120
AAAAISHESA DLNNNKVENN GGEITGSDVR GGEGVMNWQS ARLKSEILAH PLYEQLLSAH  180
VACLRIATPV DQLPRIDAQL AQSQHVVGKY SGLGHGSIGD DKELDQFMNT SNHQYAYVLL  240
LCSFKEQLQQ HVRVHAMEAV MACWEIEQSL QSLTGVSPGE GTGATMSDDD DDQVDSDTNL  300
FDGSLEGADI LGFGPLVPTE SERSLMERVR QELKHELKQG YKEKIVDIRE EILRKRRAGK  360
LPGDTTSMLK AWWQSHSKWP YPTEEDKARL VQETGLQLKQ INNWFINQRK RNWHSNSSTS  420
TVLKSKRKSN AGDNSGDCFM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-180	TALE family protein