PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028070696.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

GRF

Protein Properties

Length: 356aa MW: 39256.5 Da PI: 8.0602

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028070696.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.4	7.1e-25	83	127	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ XP_028070696.1 83 DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVES 127 79****************************************986 PP
2	QLQ	61.1	3.2e-21	20	56	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+FT +Q+q+L++Q+l++KyL+a++PvPp+L++ iqk XP_028070696.1 20 SPFTVSQWQELEHQALIFKYLMAGLPVPPDLVLLIQK 56 89*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MNSTSMVAAS VAGMRSSSAS PFTVSQWQEL EHQALIFKYL MAGLPVPPDL VLLIQKSFDY 60 ISATTFFHQP TMGYCSLYGK KVDPEPGRCR RTDGKKWRCS KDAYPDSKYC ERHMHRGRNR 120 SRKPVESQTV SQSSSLSSTT LTSLTVAPAG RSNTGSGGAG SFQNLPLLHS FGNTQAPAAG 180 SGGSNQSQLH LESIPYGIPR KDYRYVHGLK PDVGEHSFFS EASGSNRDLQ MDSPPVAVDN 240 TWPLMPSRVS LFPTSKASDN SMMHQNHYPP PHPRHSFFSS NDFGTGGEHV KEEGVHTQFL 300 RPFFDEWPRT TRDTWSGLED ERSNQTSFST TQLSISIPMA SSSDFSTTSS QSPHDS

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MNSTSMVAAS VAGMRSSSAS PFTVSQWQEL EHQALIFKYL MAGLPVPPDL VLLIQKSFDY  60
ISATTFFHQP TMGYCSLYGK KVDPEPGRCR RTDGKKWRCS KDAYPDSKYC ERHMHRGRNR  120
SRKPVESQTV SQSSSLSSTT LTSLTVAPAG RSNTGSGGAG SFQNLPLLHS FGNTQAPAAG  180
SGGSNQSQLH LESIPYGIPR KDYRYVHGLK PDVGEHSFFS EASGSNRDLQ MDSPPVAVDN  240
TWPLMPSRVS LFPTSKASDN SMMHQNHYPP PHPRHSFFSS NDFGTGGEHV KEEGVHTQFL  300
RPFFDEWPRT TRDTWSGLED ERSNQTSFST TQLSISIPMA SSSDFSTTSS QSPHDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	7e-45	GRF family protein