PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028070641.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 229aa MW: 24233.1 Da PI: 6.0747 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.5 | 1.3e-16 | 68 | 116 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r +++g+Wv+eIr+p++ ++r++lg++ t+e+Aa+a++ a+++l+g XP_028070641.1 68 IYRGIR--SRSGKWVSEIREPRK---TTRIWLGTYPTPEMAAAAYDVAALALKG 116 69***6..678*********843...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MADPPPHTNL RQVDQLSYLD PPPPAHSVSI TTCENIFSPY HHHRPNAAMS STSSGGSPSR 60 PPPGKHPIYR GIRSRSGKWV SEIREPRKTT RIWLGTYPTP EMAAAAYDVA ALALKGNNVI 120 LNFPEYLHGY PVPASSAAAD IRSAAASAAL LMKPESGVNP MAALPGGDGG GGSAPAAGHE 180 FVDEEALFGM PNLLVDMAEG MLMSPPRMNS SPSDDSPGNS DGESLWSYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 1e-35 | ERF family protein |