PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028070623.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 787aa MW: 85804.3 Da PI: 7.1554

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028070623.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.8	4.9e-10	589	626	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++++ LA+++gL+ +qV++WF N R + XP_028070623.1 589 FEHflHPYPTDTDKQMLANQTGLSRNQVSNWFINARVR 626 554459******************************87 PP
2	BELL	116	1.9e-37	444	512	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e q+kkakLl ++eeV++rYkqy++q+q+v+ssFe vagl +a+pY+slAlk++S+hFrcLk+ai++q+ XP_028070623.1 444 EFQQKKAKLLFMQEEVCRRYKQYHQQMQMVVSSFESVAGLSAATPYISLALKTVSKHFRCLKNAISDQL 512 789***************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 787 aa Download sequence
MSNFRPESHV AQQSRRDKLR VQQSSTTAQS QHLEDYPNNQ GLNPDVFQVP NVRYGNISYN 60 PAMFSSQMLN FAVTKDAMEV VHQESIGVPP DHRQIADEIT SVANSTHPIS SPKVSGGPQS 120 CGTWKSIGGS QQSCDWIGNY SSGLTSSESN HNNPLFVNSI ASSSFSGYQY VVQSSLINSS 180 SEISSQNREK GYEEMQFNSL PLYQNAQLAA GVTLATAGPG SWSDGGNELP LLPNCGDQSI 240 PLRLNDASSA WMSRPEEGCH HQWSTSELGF LASKSDRDLR SVASDSNTHG LSLSLSHGGQ 300 FGEDLHSGTT GVFNDLRNLK PSIDSGKNTC QDMIRSSTFT HRNTGPLGPF TGYATILKGS 360 RFLKPAQKLL DEICIGSDRE KPIKKSEVSD KVSADAGNAA KSMVGLGDKG GDHSGVLSST 420 IYSSNEIRGE GGVGSSSSES YGPEFQQKKA KLLFMQEEVC RRYKQYHQQM QMVVSSFESV 480 AGLSAATPYI SLALKTVSKH FRCLKNAISD QLRYIRKALG EDLSSPTTCA SSRKGDDRST 540 SKLTFADHSF SKQKSGGGNL SFFEAQQHIW RPQRGLPERS VAVLRAWLFE HFLHPYPTDT 600 DKQMLANQTG LSRNQVSNWF INARVRVWKP MVEEIHMLET KGLAEPNSNM SKNDGRPAAE 660 GAGCSNSDQI ISRLGVISTP GEQVECLQIG SLSGTGVGQN AAEQWNQDKR SRLHCQIPAS 720 MDGSLMGGFV PYQRSGLEIG GLGAVSLTLG LRQSAESSQQ QQQQLQQQHE HQLMQHFGGQ 780 MIHDFVG

Sequence ? help Back to Top

Protein Sequence Length: 787 aa Download sequence

MSNFRPESHV AQQSRRDKLR VQQSSTTAQS QHLEDYPNNQ GLNPDVFQVP NVRYGNISYN  60
PAMFSSQMLN FAVTKDAMEV VHQESIGVPP DHRQIADEIT SVANSTHPIS SPKVSGGPQS  120
CGTWKSIGGS QQSCDWIGNY SSGLTSSESN HNNPLFVNSI ASSSFSGYQY VVQSSLINSS  180
SEISSQNREK GYEEMQFNSL PLYQNAQLAA GVTLATAGPG SWSDGGNELP LLPNCGDQSI  240
PLRLNDASSA WMSRPEEGCH HQWSTSELGF LASKSDRDLR SVASDSNTHG LSLSLSHGGQ  300
FGEDLHSGTT GVFNDLRNLK PSIDSGKNTC QDMIRSSTFT HRNTGPLGPF TGYATILKGS  360
RFLKPAQKLL DEICIGSDRE KPIKKSEVSD KVSADAGNAA KSMVGLGDKG GDHSGVLSST  420
IYSSNEIRGE GGVGSSSSES YGPEFQQKKA KLLFMQEEVC RRYKQYHQQM QMVVSSFESV  480
AGLSAATPYI SLALKTVSKH FRCLKNAISD QLRYIRKALG EDLSSPTTCA SSRKGDDRST  540
SKLTFADHSF SKQKSGGGNL SFFEAQQHIW RPQRGLPERS VAVLRAWLFE HFLHPYPTDT  600
DKQMLANQTG LSRNQVSNWF INARVRVWKP MVEEIHMLET KGLAEPNSNM SKNDGRPAAE  660
GAGCSNSDQI ISRLGVISTP GEQVECLQIG SLSGTGVGQN AAEQWNQDKR SRLHCQIPAS  720
MDGSLMGGFV PYQRSGLEIG GLGAVSLTLG LRQSAESSQQ QQQQLQQQHE HQLMQHFGGQ  780
MIHDFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	3e-88	TALE family protein