PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028070622.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 789aa MW: 86066.6 Da PI: 7.0597

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028070622.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	30.8	4.9e-10	591	628	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++++ LA+++gL+ +qV++WF N R + XP_028070622.1 591 FEHflHPYPTDTDKQMLANQTGLSRNQVSNWFINARVR 628 554459******************************87 PP
2	BELL	116	1.9e-37	446	514	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e q+kkakLl ++eeV++rYkqy++q+q+v+ssFe vagl +a+pY+slAlk++S+hFrcLk+ai++q+ XP_028070622.1 446 EFQQKKAKLLFMQEEVCRRYKQYHQQMQMVVSSFESVAGLSAATPYISLALKTVSKHFRCLKNAISDQL 514 789***************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 789 aa Download sequence
MDFSNFRPES HVAQQSRRDK LRVQQSSTTA QSQHLEDYPN NQGLNPDVFQ VPNVRYGNIS 60 YNPAMFSSQM LNFAVTKDAM EVVHQESIGV PPDHRQIADE ITSVANSTHP ISSPKVSGGP 120 QSCGTWKSIG GSQQSCDWIG NYSSGLTSSE SNHNNPLFVN SIASSSFSGY QYVVQSSLIN 180 SSSEISSQNR EKGYEEMQFN SLPLYQNAQL AAGVTLATAG PGSWSDGGNE LPLLPNCGDQ 240 SIPLRLNDAS SAWMSRPEEG CHHQWSTSEL GFLASKSDRD LRSVASDSNT HGLSLSLSHG 300 GQFGEDLHSG TTGVFNDLRN LKPSIDSGKN TCQDMIRSST FTHRNTGPLG PFTGYATILK 360 GSRFLKPAQK LLDEICIGSD REKPIKKSEV SDKVSADAGN AAKSMVGLGD KGGDHSGVLS 420 STIYSSNEIR GEGGVGSSSS ESYGPEFQQK KAKLLFMQEE VCRRYKQYHQ QMQMVVSSFE 480 SVAGLSAATP YISLALKTVS KHFRCLKNAI SDQLRYIRKA LGEDLSSPTT CASSRKGDDR 540 STSKLTFADH SFSKQKSGGG NLSFFEAQQH IWRPQRGLPE RSVAVLRAWL FEHFLHPYPT 600 DTDKQMLANQ TGLSRNQVSN WFINARVRVW KPMVEEIHML ETKGLAEPNS NMSKNDGRPA 660 AEGAGCSNSD QIISRLGVIS TPGEQVECLQ IGSLSGTGVG QNAAEQWNQD KRSRLHCQIP 720 ASMDGSLMGG FVPYQRSGLE IGGLGAVSLT LGLRQSAESS QQQQQQLQQQ HEHQLMQHFG 780 GQMIHDFVG

Sequence ? help Back to Top

Protein Sequence Length: 789 aa Download sequence

MDFSNFRPES HVAQQSRRDK LRVQQSSTTA QSQHLEDYPN NQGLNPDVFQ VPNVRYGNIS  60
YNPAMFSSQM LNFAVTKDAM EVVHQESIGV PPDHRQIADE ITSVANSTHP ISSPKVSGGP  120
QSCGTWKSIG GSQQSCDWIG NYSSGLTSSE SNHNNPLFVN SIASSSFSGY QYVVQSSLIN  180
SSSEISSQNR EKGYEEMQFN SLPLYQNAQL AAGVTLATAG PGSWSDGGNE LPLLPNCGDQ  240
SIPLRLNDAS SAWMSRPEEG CHHQWSTSEL GFLASKSDRD LRSVASDSNT HGLSLSLSHG  300
GQFGEDLHSG TTGVFNDLRN LKPSIDSGKN TCQDMIRSST FTHRNTGPLG PFTGYATILK  360
GSRFLKPAQK LLDEICIGSD REKPIKKSEV SDKVSADAGN AAKSMVGLGD KGGDHSGVLS  420
STIYSSNEIR GEGGVGSSSS ESYGPEFQQK KAKLLFMQEE VCRRYKQYHQ QMQMVVSSFE  480
SVAGLSAATP YISLALKTVS KHFRCLKNAI SDQLRYIRKA LGEDLSSPTT CASSRKGDDR  540
STSKLTFADH SFSKQKSGGG NLSFFEAQQH IWRPQRGLPE RSVAVLRAWL FEHFLHPYPT  600
DTDKQMLANQ TGLSRNQVSN WFINARVRVW KPMVEEIHML ETKGLAEPNS NMSKNDGRPA  660
AEGAGCSNSD QIISRLGVIS TPGEQVECLQ IGSLSGTGVG QNAAEQWNQD KRSRLHCQIP  720
ASMDGSLMGG FVPYQRSGLE IGGLGAVSLT LGLRQSAESS QQQQQQLQQQ HEHQLMQHFG  780
GQMIHDFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	3e-88	TALE family protein