PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028070574.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ARF

Protein Properties

Length: 702aa MW: 77738 Da PI: 7.1294

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028070574.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.6	1.2e-23	112	214	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ ++ + t++ +d +g+ W++++iyr++++r++lt+GW++Fv++++L +gD++vF + g + XP_028070574.1 112 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFLR-GAE 203 89**************************996555555..8********************************************5.449 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_028070574.1 204 NGDLCVGIRRA 214 9999**997 PP
2	Auxin_resp	116.2	2.9e-38	282	365	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++FevvY+Prast+eF++k+++v+++++++++ GmRfkm fetedss++++ +Gtv++v+ +dp+rWpnS+Wr+L+ XP_028070574.1 282 AATLAANGQAFEVVYYPRASTPEFCIKASSVRASMRIQWCSGMRFKMPFETEDSSRISWfMGTVASVQVADPIRWPNSPWRLLQ 365 68899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 702 aa Download sequence
MKEVEEKSLD SQLWHACAGG MVQMPLVNSK VFYFPQGHAE HALTTVHFGA LPRLPALILC 60 RVTAVKFMAD AETDEVYAKI RLIPMRSNEL DYDDDGVLGS NGSESPEKPA SFAKTLTQSD 120 ANNGGGFSVP RYCAETIFPR LDYSADPPVQ TVIAKDVHGE IWKFRHIYRG TPRRHLLTTG 180 WSSFVNQKKL VAGDSIVFLR GAENGDLCVG IRRAKRGITG GPESPSGWNS GSGNCVSSYG 240 SFSVFMREDE NKLMRNGSNG NLNSGGGFRG RGRVRPEAVV EAATLAANGQ AFEVVYYPRA 300 STPEFCIKAS SVRASMRIQW CSGMRFKMPF ETEDSSRISW FMGTVASVQV ADPIRWPNSP 360 WRLLQVTWDE PDLLHNVKHV SPWLVELVSN MPVIHMSPFS PPRKKLRFPQ HPDFPLDGQF 420 SMPSFSRNPL GPSSPLCCLS DNIPAGIQGA RHSQFGIPLS DLYLHNKLQL DLFPSSLQQL 480 DPHGKLSDGL VSTHKNSNDN VSCLLTMGNS NSKSDKTDNL KTPQFVLFGQ PILTEQQIAC 540 SCSGDAVSKV VNFPEKKERS AFDQQWVPEN LSCVAFPWRQ GFHMTELGLD TGHCKVFMES 600 EYVGRNLDLS VIGSYEELYK RVANMFGIER SETPCHVLYQ DATGNVKHTG DEPFSDFMKT 660 AKRLTILLDS GNNFGRQWMT GLQNAENGLD SSNQTGPLSI FA

Sequence ? help Back to Top

Protein Sequence Length: 702 aa Download sequence

MKEVEEKSLD SQLWHACAGG MVQMPLVNSK VFYFPQGHAE HALTTVHFGA LPRLPALILC  60
RVTAVKFMAD AETDEVYAKI RLIPMRSNEL DYDDDGVLGS NGSESPEKPA SFAKTLTQSD  120
ANNGGGFSVP RYCAETIFPR LDYSADPPVQ TVIAKDVHGE IWKFRHIYRG TPRRHLLTTG  180
WSSFVNQKKL VAGDSIVFLR GAENGDLCVG IRRAKRGITG GPESPSGWNS GSGNCVSSYG  240
SFSVFMREDE NKLMRNGSNG NLNSGGGFRG RGRVRPEAVV EAATLAANGQ AFEVVYYPRA  300
STPEFCIKAS SVRASMRIQW CSGMRFKMPF ETEDSSRISW FMGTVASVQV ADPIRWPNSP  360
WRLLQVTWDE PDLLHNVKHV SPWLVELVSN MPVIHMSPFS PPRKKLRFPQ HPDFPLDGQF  420
SMPSFSRNPL GPSSPLCCLS DNIPAGIQGA RHSQFGIPLS DLYLHNKLQL DLFPSSLQQL  480
DPHGKLSDGL VSTHKNSNDN VSCLLTMGNS NSKSDKTDNL KTPQFVLFGQ PILTEQQIAC  540
SCSGDAVSKV VNFPEKKERS AFDQQWVPEN LSCVAFPWRQ GFHMTELGLD TGHCKVFMES  600
EYVGRNLDLS VIGSYEELYK RVANMFGIER SETPCHVLYQ DATGNVKHTG DEPFSDFMKT  660
AKRLTILLDS GNNFGRQWMT GLQNAENGLD SSNQTGPLSI FA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28350.1	0.0	ARF family protein