PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028070172.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HSF
Protein Properties Length: 297aa    MW: 33740.3 Da    PI: 6.1096
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028070172.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind100.51.5e-31251162102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Flkk+++++ed++++ +isw+++++s+vv+d+++f++++LpkyFkh+nf+SF+ QL +YgFk+++++          weF+++ F+ gkk+ll++
  XP_028070172.1  25 FLKKTFHMVEDPDTDIIISWTASQKSLVVWDHRQFSTNLLPKYFKHNNFSSFICQLYTYGFKRIDSDG---------WEFANEAFQGGKKHLLKN 110
                     9********************999****************************************9988.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     ikr+k+
  XP_028070172.1 111 IKRRKH 116
                     ****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MPCSPPISSA PKPMVGLHET GPSPFLKKTF HMVEDPDTDI IISWTASQKS LVVWDHRQFS  60
TNLLPKYFKH NNFSSFICQL YTYGFKRIDS DGWEFANEAF QGGKKHLLKN IKRRKHNPQN  120
VQQQGVMRPY LNSANFGIET ELEKLRNERM KMKMEIMKLK LQQENTESYL AAVKERIGNT  180
ENKQQHILIF MAKAFSNQEV LTTNDSEVEK LFSASLDVES SPSEDQKINA SPGPMSPDLS  240
YEDYILWEKL LEDGVICENG SAQVEAELVQ HQSKNLIAKP PDWGLLCEGL GGATELS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1108114LKNIKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.12e-65HSF family protein